Gene Patl_3492 details

Gene Information

• Locus tag: Patl_3492
• ID: 4175271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 4193497
• End bp: 4194207
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638056521
• Product: twin-arginine translocation pathway signal
• Protein accession: YP_663048
• Protein GI: 109899793

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTGC ATCGTCGAAA ATTTATTAAA AACGTGTGTG TGGCGTTTGC TGCACAGGCG 
TTATTTCGTG GTACGTATTC ATGGGCCCAA AGCAGCGACT ACGATTTCTA TTTCACCCGC 
TTAAGTTACG AATCTGGTGA TTGGGAAGTA GACGAGCGTA TGCCCGCCAA CGTGCTCAAC 
TCATTGATTG AATACACCAG CCTGCGGGTA GACATTAAAG AACGCATTGT GCCTTTATCA 
GACCCTGCCA TGCTAAACGC GCCTTTTTGC TATATGGCGG GCCACAGATT AGTGCAATTT 
AGTGACGCTG AAGCACAAAA CTTTAAGCGT TACGTGGAAA ATGGCGGCTT CGTTTTTGTA 
GATGATTGCA ACCACGATAT AGACGGCATG TTCGCTAAAA CCTTTGAAGC ACAAATGGGC 
AGTCTGTTTG GGGAAGAAGC GCTACAAAAA ATACCTAACG ATCACCCAAT TTACAGCGCC 
TTTTTTGCTT TTGATGGCCC GCCGCGCACC TCTATCGAGC TCAACGGCTG GGGTGATGAT 
CTGGTTCACA ACTACCTTAA AGCCATTATC GTTAACGGAA AAATAGCGGT GCTATACAGC 
AACAAAGACT TAGGCTGCGA GTGGGATTAC GATTTTCGCA ACAAGCGATG GCTTAAAGAG 
GACAACACAA AATTTGCGGT GAATATCGTG TTGTACGCTA TGACAGCGTA A 

 

Protein sequence

MKLHRRKFIK NVCVAFAAQA LFRGTYSWAQ SSDYDFYFTR LSYESGDWEV DERMPANVLN 
SLIEYTSLRV DIKERIVPLS DPAMLNAPFC YMAGHRLVQF SDAEAQNFKR YVENGGFVFV 
DDCNHDIDGM FAKTFEAQMG SLFGEEALQK IPNDHPIYSA FFAFDGPPRT SIELNGWGDD 
LVHNYLKAII VNGKIAVLYS NKDLGCEWDY DFRNKRWLKE DNTKFAVNIV LYAMTA