Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3459 |
Symbol | |
ID | 4175236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4151323 |
End bp | 4153071 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638056486 |
Product | gamma-glutamyltransferase |
Protein accession | YP_663015 |
Protein GI | 109899760 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000240901 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTTC ATATACTCGC CTTCGGGGTG TTATCCGTCA GCCTTTGGGG TTGTAGCTCA GCGGAGAACC AAACAGAAAT AAGAGCAGCA CTGCCTCAAC AGCAGGCCAT GGTGGTCACT GCTAACCCCC ACGCTACAGC CGCAGGATTA GAAGTATTGC GCGCTGGTGG TTCAGCGGTC GACGCGGCTA TCGCCATTGA ATCAGTATTG AGTCTCGTTG AGCCGCAAAG CTCTGGCCTA GCCGGCGGTG CATTTATGGT GCATTACGAC AACGAAACAA AATCAATCGC AGTTTACGAT GGCCGTGAGA GTGCACCAAG TGGTGCTAAG CCTGATATGT TCATGCTTGA GAACGGCGAT TCAATGTCGT ATATCGATGC AAAAACTAGC GGCTTATCCA CCGGCGTACC TGGCATCGTC GCCATGTTAT CCATGGCCCA TAAAGACCAA GGTACCTTAG AGTGGAGTAG CTTGTTCAGC TATGCCAGTA AACTCGCTAC CGATGGTTTT GAAATATCTC CTCGATTGCA CGGCATGCTC GAACGATTTG GTAAATATAT CCCCAGCTCC CGTGACCAAG GCCCGTTAGA TGCGCACAAT TATTTTTTTG ATGACGCCGG CCAGCCTCAT CCAACGGGTT ATTTATTAAA AAACCCTGAG TACGCGAAAA CACTAGCGAT CATCGCTAAC GACCCAAGCG ACTTTTACCA CGGTGATATT GCTAAAAAGA TTGCTGCCAT GGTGCAGCAG CAGCCAAGAG CGGGCTCGTT AACGGCTGAA GATATCGCAG CTTATCAGCC GGTTAAGCGC ACCGCACTGT GTCAGGATTA CCGTGATACG CAAATTTGTG GCGCACCGCC ACCGTCTTCA TGGTTGGCTG TAGGCATGAT CATGGGTATT TTAGAAAACG GCCCGCGCCC GAGTGCTGCT GGCCCCACAG ATCCGAAAAA TTGGGCTGTT TTGGCTCAAG CTCAACAGTT GGCCTATGCC GACAGAGACC AATTTATTGC CGACCCTAAC TTTATCGATA TGCCCATAAC CGGCATGTTG AATAAAGCGT ATTTGGCAAA ACGAGCCACC TTGATCTCTG ATAAGGCAAC CCCTGAGACT TACGCAGTAG GCGACCCTTG GGCGTATAAC GACACACCCA GAAATACAAC AGCCGGTATT GACGCGACCC GAGATGTACA CGGCACGACC CACTTCGTCA TTGTGGATAC CAAAGGCGAT GTGGTGTCTA TGACGGCAAC CGTTGAAAGT ATCTTCGGTA CCACGCGCAT GGTAGGCGGT ATGTTTTTGA ACAATCAGTT AACGGATTTC TCGTTTCAGC ACCATGATAA AAACGGCAAT GCTATCGTCA ATGCTGTAGC GGCAAATAAA CGCCCGCGCT CATCTATGTC ACCTTCCATC GTGCTGGACA AAAACGGTGA GTTCTTGTTA GCAACCGGCT CTCCTGGCGG CAACAACATC ATCGCTTACA CAGTGAAAAC CTTGGTTGGC GTGTTCGAGT GGGACCTAAG TCCACAAGCC GCAGTTGACT TACCAAACAT GGTTGCCAGA GGCAAAACCG TGCGTTTAGA AAAAGACGTT GCGCCCGATT CACTTATCTC AGCCATGAAA GACATGGGCT TCGATGTTGA TGCATCAAAA GGTGAGAATT CAGGTTTAAG TGTGATTATG CGCCAGCCTG ATGGCAGCCT AGAAGGTGCA GCAGATAAGC GCAGAGAAGG CGTAATCGGC TCACTTTAA
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Protein sequence | MKFHILAFGV LSVSLWGCSS AENQTEIRAA LPQQQAMVVT ANPHATAAGL EVLRAGGSAV DAAIAIESVL SLVEPQSSGL AGGAFMVHYD NETKSIAVYD GRESAPSGAK PDMFMLENGD SMSYIDAKTS GLSTGVPGIV AMLSMAHKDQ GTLEWSSLFS YASKLATDGF EISPRLHGML ERFGKYIPSS RDQGPLDAHN YFFDDAGQPH PTGYLLKNPE YAKTLAIIAN DPSDFYHGDI AKKIAAMVQQ QPRAGSLTAE DIAAYQPVKR TALCQDYRDT QICGAPPPSS WLAVGMIMGI LENGPRPSAA GPTDPKNWAV LAQAQQLAYA DRDQFIADPN FIDMPITGML NKAYLAKRAT LISDKATPET YAVGDPWAYN DTPRNTTAGI DATRDVHGTT HFVIVDTKGD VVSMTATVES IFGTTRMVGG MFLNNQLTDF SFQHHDKNGN AIVNAVAANK RPRSSMSPSI VLDKNGEFLL ATGSPGGNNI IAYTVKTLVG VFEWDLSPQA AVDLPNMVAR GKTVRLEKDV APDSLISAMK DMGFDVDASK GENSGLSVIM RQPDGSLEGA ADKRREGVIG SL
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