| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3421 |
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| Symbol | |
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| ID | 4175198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4098790 |
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| End bp | 4099596 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056452 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_662981 |
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| Protein GI | 109899726 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.747318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAC AACATTTAGG CCACACAGCC AGAAAACGTT TCGGTCAGAA CTTTCTTCAC
GACCCTTACA TTATTGATCA AATCGTATCT GCCATTAACC CACAAGTGGG ACAAAACGTG
GTAGAAATAG GCCCGGGTTT AGGCGCACTT ACCGAACCGG TTTGCGAACT GATTGATAAG
CTAACCGTAG TCGAGTTAGA CCGCGACCTT GCCCAGCGTT TGCGTACGCA CCCGTTCATT
GCCAGTAAGC TGAACATCGT AGAAAAGGAC GCCCTAAAGT TCGATTTTTC TGAGTTGTTC
AGTGAAGAGC ATCCGTTAAG AGTATTCGGT AACTTACCAT ATAATATTTC AACCCCTTTG
ATGTTCCATT TGTTTTCGTT CGCGCACAAA GTGCAAGACA TGCATTTTAT GCTGCAAAAA
GAAGTGGTAA ACAGGCTGGC TGCATCACCG GGTAACAAGA ACTATGGCCG CTTGTCTGTG
ATGGCGCAGT ATCACTGCCA CATCATGCCG GTTATTCATG TCCCGCCAGG GGCCTTTAAC
CCACCGCCTA AAGTCGATTC AGCTGTGGTG CGTCTTATTC CCCACAAGGT TAGGCCGGTA
GAGGTAAAAA GCGAAGAAGC ACTTAACCGC GTATGTGCTC AAGCGTTTAA TCAACGCCGT
AAAACCATTC GCAATAGCTT GAAAGAAAGC CTTAGCGAAG CGCAACTTAT CTCGTTGGAT
ATTAACCCTG AATTACGAGC GGAAAACTTA TCACTGGCTC AATTTGGACA GATTGCCGAT
CTTGCGTTTA GTACTCAGGA GGATTAA
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| Protein sequence | MSKQHLGHTA RKRFGQNFLH DPYIIDQIVS AINPQVGQNV VEIGPGLGAL TEPVCELIDK
LTVVELDRDL AQRLRTHPFI ASKLNIVEKD ALKFDFSELF SEEHPLRVFG NLPYNISTPL
MFHLFSFAHK VQDMHFMLQK EVVNRLAASP GNKNYGRLSV MAQYHCHIMP VIHVPPGAFN
PPPKVDSAVV RLIPHKVRPV EVKSEEALNR VCAQAFNQRR KTIRNSLKES LSEAQLISLD
INPELRAENL SLAQFGQIAD LAFSTQED
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