| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3363 |
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| Symbol | |
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| ID | 4175140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4035445 |
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| End bp | 4036461 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056394 |
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| Product | aspartate-semialdehyde dehydrogenase |
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| Protein accession | YP_662923 |
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| Protein GI | 109899668 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.81581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGGT CTTTTGATGT CGCCGTGTTG GGTGCTACTG GTTTAGTAGG ACAACACATG
ATTGAAATTC TTGAACAAAG AGGATTTCCA GTCAATAAAC TTTACCCATT GGCAAGTTCA
CGTTCTGCTG GTGGTACGGT GACGTTTAAG GGTGAAGAAG TAACTGTGCT AGACGCAGAT
ACTTTTGATT GGAGCCTAGT GCAATTGGGT TTCTTTTCAG CAGGCGGCAG TGTTTCTGAG
AAATTTGCAC CTATCGCTGC AGAAGCAGGT TGCGTGGTTA TCGATAATAC ATCGCACTAC
CGTTATGAAC CGGATATCCC TCTAGTGGTG CCGGAAGTGA ATGCTCATGC ATTGGCTGAT
TTTCGTAACC GCAACATCAT CGCTAACCCT AACTGTTCAA CCATCCAAAT GATGGTAGCA
CTTAAACCAA TCCACGACGC AGTGGGTATT GAGCGCATTA ACGTGTGCAC TTACCAGTCT
GTATCAGGTG GCGGGAAAGA ATCTATGGAT GAATTGGCGA AGCAAACTGC CGCGCTCCTA
AACGGGCAAG AAGCAAAGCC TGAAGCGTTT AGTCGTCAAA TCGCGTTTAA CGTAATTCCG
CAAATAGATG TGTTTTTAGA TAACGATTAC ACCAAAGAAG AAATGAAGAT GGTGTGGGAA
ACCCAGAAAA TCTTGGGTGA CGAAAGCATT CGTGTGAATG CCACCGCAGT GCGTGTTCCG
GTATTCTATG GCCACGGTGA AGCGATACAC ATAGAAACGC GTACTCCGAT TGATGCACAA
GATGCGAAAA ACTTATTGGC TGAAGCGCCG GGTATTGTTC TAAAAGCAGA CCCAGCCGAC
TTTCCTACTC AAGTAAGTGA TGCGAGCGGA AACGATGATG TTCACGTTGG GCGCGTTCGT
AACGACATTA GCCACCCCAA TGGCCTGAAT ATGTGGGTTG TTTCTGATAA CGTGCGCAAG
GGCGCTGCTA CTAACAGTGT TCAAATTGCA GAGGTGCTTA TTCGCGATTA CATGTAA
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| Protein sequence | MSRSFDVAVL GATGLVGQHM IEILEQRGFP VNKLYPLASS RSAGGTVTFK GEEVTVLDAD
TFDWSLVQLG FFSAGGSVSE KFAPIAAEAG CVVIDNTSHY RYEPDIPLVV PEVNAHALAD
FRNRNIIANP NCSTIQMMVA LKPIHDAVGI ERINVCTYQS VSGGGKESMD ELAKQTAALL
NGQEAKPEAF SRQIAFNVIP QIDVFLDNDY TKEEMKMVWE TQKILGDESI RVNATAVRVP
VFYGHGEAIH IETRTPIDAQ DAKNLLAEAP GIVLKADPAD FPTQVSDASG NDDVHVGRVR
NDISHPNGLN MWVVSDNVRK GAATNSVQIA EVLIRDYM
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