| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3349 |
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| Symbol | |
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| ID | 4175126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4013379 |
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| End bp | 4014134 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638056380 |
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| Product | regulatory protein GntR, HTH |
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| Protein accession | YP_662909 |
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| Protein GI | 109899654 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCATG TTCGTACAAA AAAATTGTCC GATGAAATAA TGGAGCGAAT TGAATCCATG
TTAATTGACG GCACTTTTCT TTCTGGACAA AAAATGCCGT CTGAACGTGA GCTGGCATTA
AAGTTTGCGG TGTCTCGTCC TTCCGTTCGT GAAGCAATAC AAAAATTGGA AGCCAAAGGA
CTAGTTGAAC GCAAGCAAGG CGGCGGAACA TTTGTAAAAC GTCGGATGAA CACGTTGCTC
ACCGACCCGT TAATGGCCTT GTTAACCACG CGGCCTGAAA CGCAATTTGA TTTATTAGAA
TTTCGTCACG CGCTCGAAGG AATGGCAGCT TATTACGCTG CGTTACGGGG ACAACAGAGT
GATTACGACG CCTTGCAAAA TGCACTGTTA AACTTACCCA GTGCAACGCA GCAAAGTGAT
CACAATAAAG AAGCCGAAGC ATTGGTTGAA TTTTATCTAA CAATGGCTAT TGCAGCCCAT
AACGTGGTGT TATTACATGT TATGCGCAGC TTCGAAGCCC TTTTAAAAGA TAATATTTAT
CGAAATTTAG TTTTTTTATC TGCCTACCCT GACGCTCAGC TGATGATTAA TTCTCAACGT
AAAAATATTG TACAAGCCAT TATTAACCGT GACCCTGAAT TGGCTCGCGA GGCAAGTAAC
GAACACCTTG GATACATAGA AAAAACCTTG TTAGATATTA ATCGTCAAGA CATGCGTATA
CAAAGAGCGT TGCGAAGAAT AGAAGTAAAA GAGTAG
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| Protein sequence | MQHVRTKKLS DEIMERIESM LIDGTFLSGQ KMPSERELAL KFAVSRPSVR EAIQKLEAKG
LVERKQGGGT FVKRRMNTLL TDPLMALLTT RPETQFDLLE FRHALEGMAA YYAALRGQQS
DYDALQNALL NLPSATQQSD HNKEAEALVE FYLTMAIAAH NVVLLHVMRS FEALLKDNIY
RNLVFLSAYP DAQLMINSQR KNIVQAIINR DPELAREASN EHLGYIEKTL LDINRQDMRI
QRALRRIEVK E
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