Gene Patl_3321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3321 
Symbol 
ID4175098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3984364 
End bp3984876 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content44% 
IMG OID638056352 
Productamino acid-binding ACT 
Protein accessionYP_662881 
Protein GI109899626 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAT TGATTTTTAC ACTTGTTGGT AAGGATAAGC GTGGCTTGGT CGACTCACTT 
GCTCAATCAG TGTTCAAATT GGGCGGAAAT TGGCTTGGCA GTAACTTGTC GTACATGGCA
GGTCACTTCG CTGGCTTTGT TGAAATTCAA TTGCCTGAGG AGAAAAAAGC AGCATTAATA
GAGCAATTCT CTACCCATCC GGATCTCTCT ATCAATTTGG TCGAAGGGGA TAACAACCTT
GCCGCCCACA CTCAAACGGT TCAAATAGAC ATAATGGGCA ATGACAAGCC TGGGATCGTG
CAAGAGCTTA CAACGATTTT GAATCGCTTC AACCTCAACA TTGTTAAATT TGACTCCACC
TGCGACAGCG CTCCTAATTG GGGTGGTTTA CTGTTTAAAG CTAACGCATT AGTTGCCATA
GAAGAGGGTT TCGATTTGGA TGAGTTGAGT GATGCATTAG AGTCCATCGC CGACGACTTG
GTGGTTGATA TCAGCTCAAC ACCAACAAAA TAG
 
Protein sequence
MKSLIFTLVG KDKRGLVDSL AQSVFKLGGN WLGSNLSYMA GHFAGFVEIQ LPEEKKAALI 
EQFSTHPDLS INLVEGDNNL AAHTQTVQID IMGNDKPGIV QELTTILNRF NLNIVKFDST
CDSAPNWGGL LFKANALVAI EEGFDLDELS DALESIADDL VVDISSTPTK