| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3299 |
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| Symbol | |
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| ID | 4175076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3960138 |
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| End bp | 3961439 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056330 |
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| Product | major facilitator transporter |
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| Protein accession | YP_662859 |
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| Protein GI | 109899604 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGCG ACGAAAAGGT GACATCGGTA TTCGGTCATA TCCTCATTAT TATACTGGCG
GGAGAGTTGA TTTTCGCTTT ACCTTTTCAT CTAGCACGCT TTTTTCGACC AACGTTCCTA
CAAGCGTTCG AGCTAACGAA CACCCAATTA GGCGATATTT TCGCTGTCTA TGGCGTTGTG
GCTATGCTGT CATATTTCCC CGGAGGCATA ATTGCTGACA AGTACCCCCC AAATCGCCTT
ATGAGCATTT CACTGTTGGC GACAGCGGCG GGGGGCTTAT ATTTACTCAG CAGGCCGAGT
CATTTGGGAC TTACACTGCT TTTTGCTTAT TGGGGCGCAA CCACTGTTTT GGTTTTTTGG
GCGGCGATGA TTAAAGCCAC TCGGCTTTCG GCTCCGCCCC ATCGTCAAGG GTTCGCATTT
GGTTTGCTCG ATGGGGGGCG TGGGTTAGCG GCAAGTCTGT TTGCCAGTGT AGGCATATTG
TTATTGAGCC TTGGGACATT CAGCTCGCAA GGCGATTTCA ACAGCTCAAC TGAAGCGTTC
GATGCTATGG GCATGCTGAT TATCTACTAC AGCACGTTAA CAGCATTAGC AGCTGGGTTA
ACTTGGTTTT TTGTCAGTTC TCAAGCTGAT AATCCATCTG ACACGTACGC TCAACAGCAG
CAACAAGCAC CTGGTTTGTC ATTCGCTTCG ACGCTTATTA ATCCCTTGGT ATGGCTGCAA
GGAGGGATCG TTATTTGCGC TTATTGTGGC TATAAAGCGC TGGACAATTA CAGCCTTTTC
GTCGTGCAGC ACTATGGTTG GTCACAAGTG GAAGGTGCCA AGTTTATTAC GTTTGCCAGT
TATATGCGCC CCGTAGCCGC GATTGGGGCA GGGTTACTCG CCGATCGCTT ACGTACGAGT
AAAATGACTT ACTTACTGTT TGCCGCACTG GGGGCGATCT TTGCGGCGAT TGCGTGGATG
ACGCATTTCA ATGCAGGAGT AACACTGGTG TTAGCCATGT TGCTGTTTAC CTTTTTTGCA
GTATTCGCTT TGCGTGGAAT TTACTTCGCG TTGGTAGACG AGAGTCAAAT TCGTATGGGG
GCGACAGGCA CTGCTGTCGG GATCATATCA GTACTGGGTT TTACCCCCGA TATTTTCTTT
GCATCTATCT CCGGTCGTAT GCTGGATGCC GGACAAAACG GCTTTGCGTA TTATTTTTTA
TTTATTGCCG CGATTATGTT TATTGGCTGT TTTTGCGCTT TGCTATTGGC CAAAAAGGTC
AAGAAATTGC GCTCGGCATC GGCTGCAAGC CCTAAAAATT AA
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| Protein sequence | MQRDEKVTSV FGHILIIILA GELIFALPFH LARFFRPTFL QAFELTNTQL GDIFAVYGVV
AMLSYFPGGI IADKYPPNRL MSISLLATAA GGLYLLSRPS HLGLTLLFAY WGATTVLVFW
AAMIKATRLS APPHRQGFAF GLLDGGRGLA ASLFASVGIL LLSLGTFSSQ GDFNSSTEAF
DAMGMLIIYY STLTALAAGL TWFFVSSQAD NPSDTYAQQQ QQAPGLSFAS TLINPLVWLQ
GGIVICAYCG YKALDNYSLF VVQHYGWSQV EGAKFITFAS YMRPVAAIGA GLLADRLRTS
KMTYLLFAAL GAIFAAIAWM THFNAGVTLV LAMLLFTFFA VFALRGIYFA LVDESQIRMG
ATGTAVGIIS VLGFTPDIFF ASISGRMLDA GQNGFAYYFL FIAAIMFIGC FCALLLAKKV
KKLRSASAAS PKN
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