Gene Patl_3271 details

Gene Information

• Locus tag: Patl_3271
• Symbol: leuD
• ID: 4175048
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 3923469
• End bp: 3924095
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638056302
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_662831
• Protein GI: 109899576
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAATC AATCTAGCCC AGCCAATGCT GGCATCAGCG TTCATACCGG TCATGTGGCG 
CCGTTAAATC AAGCCAATGT CGATACTGAC CAAATCATTC CTAAGCAGTT TTTAACGTCA 
GTGACGAAAA GCGGTTACGG AAAGCATTTA TTTCATGATT GGCGTTATTT GGATCTTCAC 
GAACAAGAGC CAAACCCTGA TTTCGTGTTA AACAAACCTG AGTATCAAGG GGCCAGTATT 
TTGCTAACCC GTGAAAACTT TGGTTGTGGT TCTAGCCGCG AACATGCGCC TTGGTCCCTC 
GATGATTACG GCTTTAAAGT CGTTATCGCG ACCAGCTTTG CTGATATTTT TTACGGTAAC 
TGCATCAATA ACAGTCTGTT ACCTGTGCAA CTTGAAAGCG CGCAAATTGA CGCCCTCTTC 
GACGCTGTTG CACAAGATCC AGCATGTCAG GTCGTGGTAG ATTTACCCCA ACAACAAGTG 
CGTTTTCATG AGCAGGTGAT AGGTTTTGAT ATTGCCCCTC ACCATAAAAA CAATTTGATT 
AAGGGTTTAG ACGCCATTGG GCAAACCTTA GAGCTTGATG CCAAAATTAA AGCATTTGAA 
GACCAACAAC CCGCTTGGCA GCACTAG 

 

Protein sequence

MSNQSSPANA GISVHTGHVA PLNQANVDTD QIIPKQFLTS VTKSGYGKHL FHDWRYLDLH 
EQEPNPDFVL NKPEYQGASI LLTRENFGCG SSREHAPWSL DDYGFKVVIA TSFADIFYGN 
CINNSLLPVQ LESAQIDALF DAVAQDPACQ VVVDLPQQQV RFHEQVIGFD IAPHHKNNLI 
KGLDAIGQTL ELDAKIKAFE DQQPAWQH