Gene Patl_3211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3211 
Symbol 
ID4174988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp3855288 
End bp3855686 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content38% 
IMG OID638056242 
Productcytidyltransferase-like protein 
Protein accessionYP_662771 
Protein GI109899516 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0615] Cytidylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR01518] glycerol-3-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG TAATAACATT TGGCACTTTT GATGTATTTC ATGTTGGGCA TATCAACCTA 
CTTCAACGTG CCTCTATGCA TGGAGACCAG TTGATAGTCG GCGTTTCAAC TGACAAGTTG 
AATTTTTCGA AAAAAGGGCG GAACCCTGTG TACCATCAGG ATGATAGGAT GAAGATCATC 
AATAGCTTGC GCTATGTAAA TCTTTGCTTT CCTGAAGAGT CATTAGAATT GAAGGCTGAA 
TATATTCGAT ACTATAAGGC TGATGTCTTA GTAATGGGAA ATGATTGGGA AGGTAAATTC 
GATTTTTTGA AAGACTTATG TGAGGTTGTT TACCTTCCTA GAACACCCTC TATTTCAACT 
ACTGAATTGA TTGAGGTGAT CAGCTCTTCC GCTGAGTAA
 
Protein sequence
MKTVITFGTF DVFHVGHINL LQRASMHGDQ LIVGVSTDKL NFSKKGRNPV YHQDDRMKII 
NSLRYVNLCF PEESLELKAE YIRYYKADVL VMGNDWEGKF DFLKDLCEVV YLPRTPSIST 
TELIEVISSS AE