| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3205 |
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| Symbol | |
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| ID | 4174982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3847863 |
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| End bp | 3848729 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638056236 |
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| Product | rhamnosyltransferase |
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| Protein accession | YP_662765 |
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| Protein GI | 109899510 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.363372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTGGCG CGACAATAAT TCTTTACAAG CCTAAGTTGT CTCAGACACT ACCACTTTTA
TTAAGTGTGG TGGAGCAGGT AGATGTATTG AGTATTGTCG ATAATTCCCC TACGCCCACT
GAATTATCGC TCGATCATGA CAACTTACAC TATCATCATT TCCCGAACAA CATAGGTATT
GCGGCAGCGC ATAATATTGG TTTACGCGAT TTGAAAGCAG CCAATTGCGA ATATGGTATT
TTGCTCGATC AAGACAGCTC TATCGATAGT GACTTTGCTT TTCGTTTGTC TTCTTTGATG
GTTGCGTCAC GCGTTGAAAA CAGACCTCTA GTGGCTATAG GTCCCCGCAT TATTTGTTCT
TTTACCGAGA AAACGGTTAA GCCTAGAGTG CAAAGAGAGA TATCGGTTTA TGATGATTTA
GTCTGTGTCA CGCAGATTAT CTCTTCTGGC ATGATGATAG ATTTATCTAA GCTTGAAACA
ATTGGTTTTA AAGACGAAGC TTTGTTTATC GATGGTGTCG ATCACGAATG GTGCTGGCGT
GCTAAGCAGC AGAACCAGAT GGTTGCGATC GCCGAAAAGG TAGAAATGGT TCATCAACTC
GGAGATGCCC GTCACAAATT TGCTGGTGTT ACTTATAAAG TGGGTTCGCC GGTTCGTTTG
TACTACCAAT TCCGAAATAT TCTTATTTTA AGCCGCAGAG GTTATGTGCC CTGGTATTGG
AAGATGCGCA ATCTGTTATG CATGCCAATC CGCTTTTTCG CGAATGCATT TTTGCAAACA
GATCGCTGGC AACGGGTAAA ATTTATGTGT TGTGGGATAA TTGACGGATT ATTAAAACGA
GATGGTTCTT TTAGTCAGCA CTGGTAA
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| Protein sequence | MIGATIILYK PKLSQTLPLL LSVVEQVDVL SIVDNSPTPT ELSLDHDNLH YHHFPNNIGI
AAAHNIGLRD LKAANCEYGI LLDQDSSIDS DFAFRLSSLM VASRVENRPL VAIGPRIICS
FTEKTVKPRV QREISVYDDL VCVTQIISSG MMIDLSKLET IGFKDEALFI DGVDHEWCWR
AKQQNQMVAI AEKVEMVHQL GDARHKFAGV TYKVGSPVRL YYQFRNILIL SRRGYVPWYW
KMRNLLCMPI RFFANAFLQT DRWQRVKFMC CGIIDGLLKR DGSFSQHW
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