Gene Patl_3074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3074 
Symbol 
ID4174846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp3708230 
End bp3708835 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content42% 
IMG OID638056100 
Producthypothetical protein 
Protein accessionYP_662634 
Protein GI109899379 
COG category 
COG ID 
TIGRFAM ID[TIGR03585] pseudaminic acid biosynthesis N-acetyl transferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGACG TTACCAGTGA GCATTGTTTT GTACCGATTA ACGCATCCCA TTTATCAACG 
GTTTGGCATT GGCGCAATAG TGAAAGAGTG CGAGAAAATA TGCATTGCGA TAAACTTATT 
GCGTGGGATG AACATCAGCA TTGGTTTGAA GCTTTAATGC AAGATACCAA CCGTGAATGC 
TGGATTTACT GCCAACACTC TCGCCCTATT GGTGTGTTGA ACGTTAGTGA TACTCAACAT 
TCCGTGATGC AGTGGGGATG TTATCTGGGT GAGGTAAATT GCGCACCAGG TAGTGGATTA 
ATACTCGAGT GGGCTGCACT TGAGTATGCT CAACAAAAGA TAAACTGCAC TGGTCTTGAG 
GCACAAGTAT TATCTTTTAA TACTGCGGCT TTAAAACTAC ATACGCTATT TGATTACGAA 
CGAGTAAAAA TTGAAAGTGG CGGCATGCGC CGAAGCAACG GTCAGTCAGA TATTACCCAT 
TACGATATCC ATTATTTCTA TTATGCGATG CAAAAGTGGC GGCAACACCG AGACGCTGTA 
TTAGTTAAAC TACCCAAACC CATTCAAAGA GGGTGTCAGC AAGTGACATT CTTGAGTAAG 
GAATAA
 
Protein sequence
MNDVTSEHCF VPINASHLST VWHWRNSERV RENMHCDKLI AWDEHQHWFE ALMQDTNREC 
WIYCQHSRPI GVLNVSDTQH SVMQWGCYLG EVNCAPGSGL ILEWAALEYA QQKINCTGLE 
AQVLSFNTAA LKLHTLFDYE RVKIESGGMR RSNGQSDITH YDIHYFYYAM QKWRQHRDAV 
LVKLPKPIQR GCQQVTFLSK E