| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3072 |
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| Symbol | |
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| ID | 4174844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3706621 |
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| End bp | 3707967 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056098 |
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| Product | hypothetical protein |
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| Protein accession | YP_662632 |
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| Protein GI | 109899377 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCT TAGCGTCTCT TTTACTGACA AAGGCAGTCA CTCCTGTGAT TGCGAATACA
AGCCAGTCGT TTTCATTAGA GCAGTTATTG GCGCTAGCCA AGCTCTGGCG AGCTGAATAT
CAGTACCTAG AAAATAAACC TCTGGCGCTT ATTTATACCG ACAGCGCTGC TTTCTGTGTG
GGGTTACTCG CGTTTGATGG CTTGTGTAGC GACCTGTTTT TATGTTCAAC CGAGCTAGCT
GAAAGTATTG AGAATAGCTG CTCGCGGCTC ACGATAGATA TTAACTCGCC GCCCAAGCAA
GCTTATAGCC AGACTAGGAG CGCAGCAGAT GCCTCTGCTA CATCAGGCAA GTTGAAAGCG
CCACCTGATA CACGCGAAAC GGTTACTCGC TGGTGGTTAG CCTCGTCGGG TACATCAGGC
CAACCTAAAT GGTTTGCGCA TACACTCACT TCCTTAACCT TGAATACCAA ATATTCAAAC
ACGCTGTCAG AATTGAAATG GGCAAATTGC TATCAAGCCT ATCGGTACGC CGGGTTACAA
GTACTATTAC AGGTGCTCAT CAGCGGGGCA ACATTGGTGG ACGACACCAC GCATGACTTA
ATAGCAAGAC TGCAGCAATA TGCAAAGGCC AAGGTCAATG CCATATCTGC CACTCCAAGT
ATGTGGCGTC AAATGCTGAT GACAAACCAG TTACAACGCG TGCCACTAAA GCGCATCACA
TTAGGCGGAG AAATTGCGGA CCAACCATTG CTCGATAAGC TCTCTGAACT TTATCCCCAG
GCTAGTATTC GGCACATATA TGCCTCTACA GAAGCAGGAG TCGGGTTTGT AGTGAAAGAT
AAACTAGCCG GATTTCCTGT TAGTTGGTTA CAGCAAGGGA TGAGCAACGC GCAATTAGCA
ATCGATGAAA AACAACATTT ACGCATAAAA CCCAAGCATG AACTAGATGC GCAACTTGAT
ACACTTATCG ATGACGAGGG GTATCTAGAT ACGCAGGACA TCGTGCAAGC AGACGGCGAT
AGAGTACATT TTCTCGGGCG TGCGTCTGGC GTTATTAATG TTGGCGGAAA TAAAGTACCA
CCAGAAAAAG TCGAATCAGT CATTTTGTCG GTTAAAGGAG TGTCTCAGGC AAAAGTGTAT
GGGCAGCCCA ATAGTGTACT GGGCAACCTT GTCGTGGCTG ATATTCTTAT TGAGCCCAAT
CAAGACTGGG GGAATATTAG CCGAACTGTT CGCGCACAGT GTAAATTGAT GCTACAACGC
TTTGAAATTC CTGTAAAATT ACGTCAAATT GACAGTTTAG TGATGTGCCC AACGGGCAAA
TTAAGCAGGA GCGATGATCA TGTCTGA
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| Protein sequence | MSSLASLLLT KAVTPVIANT SQSFSLEQLL ALAKLWRAEY QYLENKPLAL IYTDSAAFCV
GLLAFDGLCS DLFLCSTELA ESIENSCSRL TIDINSPPKQ AYSQTRSAAD ASATSGKLKA
PPDTRETVTR WWLASSGTSG QPKWFAHTLT SLTLNTKYSN TLSELKWANC YQAYRYAGLQ
VLLQVLISGA TLVDDTTHDL IARLQQYAKA KVNAISATPS MWRQMLMTNQ LQRVPLKRIT
LGGEIADQPL LDKLSELYPQ ASIRHIYAST EAGVGFVVKD KLAGFPVSWL QQGMSNAQLA
IDEKQHLRIK PKHELDAQLD TLIDDEGYLD TQDIVQADGD RVHFLGRASG VINVGGNKVP
PEKVESVILS VKGVSQAKVY GQPNSVLGNL VVADILIEPN QDWGNISRTV RAQCKLMLQR
FEIPVKLRQI DSLVMCPTGK LSRSDDHV
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