Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3054 |
Symbol | |
ID | 4174826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3689153 |
End bp | 3689950 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638056080 |
Product | hypothetical protein |
Protein accession | YP_662614 |
Protein GI | 109899359 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTAA AAAATGTTAA ACACTGCGCT AAGGCTGAGA ATTTTTTAGA AGAATTAACT GCAATGGTAG TTAATCGTTC TATAGAAGTT AGTGTCAAAA ACAACAACCC ATTACCAAAA GTGTTTTACA TTGGCATTGG AAAAACAGGT TCGAGCTCGA TAAAAAAATA TATAAATGAA ACTGTGGCTC ATTGGCATGA CGAGAGCTAT TTTGAAGAAA TTTATCAAAC TGACTTGTTG ACAAAAAATA ACCTTTGTTT GTACGACTTG ATCTTATACA TGGGCAAACA ATATAAGTTT AAACCTTTAA TTATTGAAAC ATATAGAGAG CCGGTAGCTA GATCTATTTC TGGGTTAGCC CACAGAAACC GTATTTCAGA ACTCTCAACA ACAAACTATG AAGAATTTAA AAATAGGATA ACGGTTGATT TCATCACATT AACCAGCCAA CCATATAGCT TAAAATGGAA GTCTTATTTT TCTGTCGATT TAATTGCCGA ATTTAGTAAA ACCACAAATT ACTTTTACAA AGAATTAACT GACATTAAAT TATTATTTCT AAAGCTCGAA GATGTGAAAA ACTGGCCACT CATTATTAAA GTCGCCGGCT ATCATTATGA AAACATCATT TCTAATGATG CAACTAAATC AAAGTTTCGT GATTTATATT CAGAAGTGAT GGCTAAATTT AGGTTGTCTG AAAAAGACCT CAATAAGATT TACCACAATA ATTTGATTAA ATCTTTTTAT ACCCAAAACG AAATTAATTC ATTTAAAAAA AAGTGGGGAA AAAACTGA
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Protein sequence | MNLKNVKHCA KAENFLEELT AMVVNRSIEV SVKNNNPLPK VFYIGIGKTG SSSIKKYINE TVAHWHDESY FEEIYQTDLL TKNNLCLYDL ILYMGKQYKF KPLIIETYRE PVARSISGLA HRNRISELST TNYEEFKNRI TVDFITLTSQ PYSLKWKSYF SVDLIAEFSK TTNYFYKELT DIKLLFLKLE DVKNWPLIIK VAGYHYENII SNDATKSKFR DLYSEVMAKF RLSEKDLNKI YHNNLIKSFY TQNEINSFKK KWGKN
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