| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3053 |
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| Symbol | |
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| ID | 4174825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3685539 |
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| End bp | 3689078 |
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| Gene Length | 3540 bp |
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| Protein Length | 1179 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638056079 |
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| Product | hypothetical protein |
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| Protein accession | YP_662613 |
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| Protein GI | 109899358 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2604] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAA ATATTCGCCT GCACTTAGAG AAAGATGAAG AAAAACAAGC CGCATTGGAT
GATGCTCTAG CTAAAAGCAT TGTTGAAACA CGCAGCAATA GCTTTAATGC ATTTCAGCGC
AATATTCCTT CACTTCTTCC CTTGATCAAA GATTCTAAGC TTTCAAACCT ATCTTTATTT
ATTAATAAGT GGGGCGAGAC CAATATCGTT GATTATGGAA TAGGCAGAAC ATTTTATGGT
TTTTACCCTC AAGAAGAAAT AAATCAGCAG GTAGCGCAGT CACTTGAACA TTGCCCTAGT
GTTGAGTTTC ACAAAACAAA AATACAATCA AAGCATACTG ATACGCTCAC AGACCCATTA
GATTTTACCC AACTGGAAAG CTTTACGACC GAGCAAGCCA TGGGTCCTAT GCCAGATGAA
GTGGAATGTT TAGTGGTACT GGGCTGTGGC CTCGGTTTGC ACATAAAGCA ATTACTTGAA
GCGAGAACGA TTAAAAACCT CATTATTTAT GAACCTGAAG TGCAGTACTT TCAATGCTCA
ACAATGGCGA CGCCTTGGGC TGATATTTTT GCTTTAGCCA AAGCAAAAGG GACTTCACTG
TTCATTCAAA TAGAGAAAGA TGGCAGAGAC TTACTGTCGG ATATAAACGA ACTTAGGGAA
CACATTTCCT TAACCCGTTT TTATGTTTAT AAGCACTATA ACCAGCAGGT GTTCGATTCG
ATTCATCAGG ATATCTGCAC GCGTAGCTGG GAAGAAATTA GCAATAATGG CTTTACCATC
GCGCGCGAGA AAAGTCATTT AGAATACGTA CCATTCTGGA CTCCTAAACT AGACTTAAAT
ACGCACCACC AAGTGTCACC CCAGAGCGCG TTATTCAAAC AGAACCTAGG CGCATTTAAA
AAATACTTCC CAAATATTTA TCAGCAATAT AAAGATTACA AACCCAAGAT TTGGTTGCCA
ATTAAAAACC AGTCTGAAGA GGTTAACGTA TTAAAGTCCG AGGGGTTGTA TCCCTGGTAC
GGAAACTCAC CAAAGCAAGA CTGCATCTTA AATTTTGAAA ATTTTAACGA ACAACCGAAT
AAAGATGGGC TCGTGCTTGG TTATAAAGGC ACCAAACTCG CGCACTATAT CCACTATCAG
TTTGTAAATG AGACCCAAGA TCTTTTAAAA GAAGCAGAAG AAGAAGTGGG TGAATTGCCC
GAAACAATTG CTTCTATCAT CATGTTCGGG CTGGGTATTG GTTACCAATT AGAAAAATTG
CTGGAAGAAC ACACGGTGGA AAAACTGTTT GTTTGCGAGC CAAACCCTGA TTTTTTTTAC
GCGTCTTTGT TCGCAATAGA TTGGCAAGCC ATCTTTGAAA AAGTAGAAGC CAGTGATGCA
CGCATATATC TGAATGTAGG TGATGATGGC ACTCACTTAT TCAATGACCT GCTAAACCAA
TTCCACTCGA TTGGCCCCTA TATTTTAAAT AATACCTATT TTTACCAAAG CTATTATAAC
GCTTCACTCA ATAGCGCCAT TGCCCAGCTC AGGGAGCAGC TTCAGGTGGT TATCTCCATG
GGAGAATACT TCGATCATGC CTATTACGGC ATCGAGCACA TGAAAGAAGG GTTCCGGCGC
GATTATCCAG TACTCATGAA TACCCCATCG CAATTCCTAA GTTATGAAGA TAAGGAAGTC
CCGGTTTTTA TAGTAGGTAA TGGGCCCTCT TTAGATATGT CGATTGAGGC AATCAAAGAA
TGGCGTGACC AGGCTATCGT CATTAGCTGT GGTACCGCCC TCCAGGCGCT TTATAAGAAT
GGCATCACGC CTGATTTTCA CGCTGAGATA GAACAAAACC GCAGCACCTT CGATTGGCCG
GTGTTGATAG GTGATTTAGA CTATTTAAAA GAAATAACGC TTATTTCCTG CAATGGTATT
CACCCAGACA CATGCGAGTT ATACAAAGAT GTACTGATCG CGTTTAAAGA GGGGGAATCA
TCAACAGTTT CTGCATTAAG TGTACTAGGA AAGCAGCACT TCGAAGTACT TCAGCAATCC
TTCCCTACTG TTAGTAATTT TGTAACTAAC ATTATTAGTG TACTGGGCTT CAACCATATT
TATTTAATGG GTGTAGATTT AGGTTTTGTT GATGTAAACC ATCATCACTC GAAGTCTTCT
GGCTATTACC AAGAAGATGG TAAAGAAACC TACGACTACT CGACCGCTAA TATCACCTCA
CTTGTTGTAC CAGGTAATTT TAGGCCTAAG GTAAATACTA AACATGAGTT TAAAGTATCA
CGGCAGATCA TCGAGCAAGT CACCCACCGA AAGCCAAAAG AACAAACCTT CTACAATTGT
AGCGACGGAG CAAGAATCAA AGGAACGACC CCACTTGAGA TCGATAATCT ACTCATCATG
GCGAGCAATG ATGAGCGTGA CCATGCTTTG GAAAAACTGC ATAAAAAGGT TTTCTCAACC
AAGCACAGTA CCCACTTTAT CGAAAAATAT GAAAAGCAAT TCTCACATAA ATTAATGCTT
GAAGAAGTGC AGCAACTGCA AGAGTTGGTT GAGGAATACT TATCAACACC TGACGATATA
AATAAGCTGA TTAATGCTCA AAAAGAGTTA CTGTTTGATT CTTATCAGAC GGGCCGCTCT
CTGCTGTTTT ATTATATGTA TGGGACGGTA AATTATGCGA ATGCTGTGTT ATTAAAGCTA
GGGGCTAGTA CTATATTAAA TGAATTTAGT AACCTTAGCA TAACTAAGAA AAAATGGTTC
ACAACCCTAA CAATTATAAA AGAGTTAATA ACAGTAAGTG AATACAATGA TTTCGACATT
TCAGCTTTTA ACTCCAATAA AAGAGAACTA ATGAGTTTGC AACATAGCTG TTCCGATAGC
TCTCTCTTAG TTGTTACTGA TTCAGCCGAA TTTAAAGAGT CTTTAAGACT ACTTTTAAAA
ATAGAATTTG CGTGGATTAA TAAATTGAAT GTCATAAATT CTGAACAACT AAATAGATAC
TCAGATGTGC CTGACTATGT TATTTACCAT TTAAATGACC CGTTAACCGT ATCTTTGTAC
GGAAGAAAAA ATACCATTAT CAGTTTGTGT AAAGATGCCA ATTTCCCTAC TGAGTATAAG
GGCGTAACTT ATCTTAAACG CCAAACCTCT GACAACGAAT TGATATTTAA TAATCCAGTG
TTTTATACCA GAGCGGCACT TATTGCATGT TTTAGTAACC CAAAATGTGA CCTTATCATT
CCTAAATATA TTGCAGCAAA TGAAGCAAAC TTAGATACCC CCATACAAAA ATTTTCAGAA
GTATATATGG CCTACAATAA TCTTTTTTAC ATTTGTTTGT TTTCAAAAGA CAATTCTCAC
CAAGAGACAA GAATCTCTAA TAACGGTACT AGAATGAAAA GAATTGTTCA GCCCCTCACG
ATTAGAGAGT TAGTGTACAA ATTAATGCCT ATGGATGAAT ATCGCAAACA TAAACAGAGT
ATTCTAGATT TGATGCATTC TAAACTGCAA TCGAGTATAG AGGCTCCGCT ACAACTTTAA
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| Protein sequence | MLKNIRLHLE KDEEKQAALD DALAKSIVET RSNSFNAFQR NIPSLLPLIK DSKLSNLSLF
INKWGETNIV DYGIGRTFYG FYPQEEINQQ VAQSLEHCPS VEFHKTKIQS KHTDTLTDPL
DFTQLESFTT EQAMGPMPDE VECLVVLGCG LGLHIKQLLE ARTIKNLIIY EPEVQYFQCS
TMATPWADIF ALAKAKGTSL FIQIEKDGRD LLSDINELRE HISLTRFYVY KHYNQQVFDS
IHQDICTRSW EEISNNGFTI AREKSHLEYV PFWTPKLDLN THHQVSPQSA LFKQNLGAFK
KYFPNIYQQY KDYKPKIWLP IKNQSEEVNV LKSEGLYPWY GNSPKQDCIL NFENFNEQPN
KDGLVLGYKG TKLAHYIHYQ FVNETQDLLK EAEEEVGELP ETIASIIMFG LGIGYQLEKL
LEEHTVEKLF VCEPNPDFFY ASLFAIDWQA IFEKVEASDA RIYLNVGDDG THLFNDLLNQ
FHSIGPYILN NTYFYQSYYN ASLNSAIAQL REQLQVVISM GEYFDHAYYG IEHMKEGFRR
DYPVLMNTPS QFLSYEDKEV PVFIVGNGPS LDMSIEAIKE WRDQAIVISC GTALQALYKN
GITPDFHAEI EQNRSTFDWP VLIGDLDYLK EITLISCNGI HPDTCELYKD VLIAFKEGES
STVSALSVLG KQHFEVLQQS FPTVSNFVTN IISVLGFNHI YLMGVDLGFV DVNHHHSKSS
GYYQEDGKET YDYSTANITS LVVPGNFRPK VNTKHEFKVS RQIIEQVTHR KPKEQTFYNC
SDGARIKGTT PLEIDNLLIM ASNDERDHAL EKLHKKVFST KHSTHFIEKY EKQFSHKLML
EEVQQLQELV EEYLSTPDDI NKLINAQKEL LFDSYQTGRS LLFYYMYGTV NYANAVLLKL
GASTILNEFS NLSITKKKWF TTLTIIKELI TVSEYNDFDI SAFNSNKREL MSLQHSCSDS
SLLVVTDSAE FKESLRLLLK IEFAWINKLN VINSEQLNRY SDVPDYVIYH LNDPLTVSLY
GRKNTIISLC KDANFPTEYK GVTYLKRQTS DNELIFNNPV FYTRAALIAC FSNPKCDLII
PKYIAANEAN LDTPIQKFSE VYMAYNNLFY ICLFSKDNSH QETRISNNGT RMKRIVQPLT
IRELVYKLMP MDEYRKHKQS ILDLMHSKLQ SSIEAPLQL
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