| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2934 |
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| Symbol | |
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| ID | 4174700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3556356 |
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| End bp | 3557681 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055955 |
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| Product | major facilitator transporter |
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| Protein accession | YP_662496 |
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| Protein GI | 109899241 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.14658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTGA ATACCAGCGA AAGCCCTGTT GTTCAGCAGG AAGATTTTAA TCAGGTGAGC
AAACCTTATC GTACCTACGT ATTAACAATA TTGACCTTGG TTTATGCCTT TAATTTTATC
GACCGACAAA TCATCGGTAT TTTATCGCCC TTTATTAAAG CTGACTTGGG TTTAAATGAC
GCGCAATTAG GCTGGTTAAA AGGGCTCTAT TTCGCGGTGC TTTACACGGT GGTGGGAATT
CCTATTGCTT GGTTAGCAGA CCGCTATAGT CGCGTTAACA TCGTTGCGAT TTCCCTCACG
CTTTGGAGTG GTTTTACCGC ACTGTCAGGT ATGGCTACGA CCTATACGCA ACTTGCCATT
GCGAGAATTG GTGTGGGGAT CGGTGAAGCG GGTGGTAGTC CACCTTCTCA CTCTATCTTG
TCTGACCTTT ACCCTAAAGA GAAACGTGCA GGTGCGTTAG CGATTTATTC GTTAGGGATC
CCATTTGGGA TCATGCTGGC GTTTTTTGCT TCCGCTTTTA TTTTAAAAGG TGGGGATGCT
AACTGGCGGC TTGTCATGCT CAGTGTGGGT ATCCCTGGGG TACTACTCGC TATTTTACTT
AAGTTAACGA TAAAGGAGCC GCCTAGGGGA GGGAACTTAC ATTCCGCGGC GGCTAAAACA
CCTTCCTGGC AGTCCATCAA AGTACTGTTA ACAATACCGT CGTGGTGGGG CATGTGTATT
GCGATTTCTT TAGCCTCATT TGGAAGTTAT GCGATTTCTA CTTGGATGAT GGACTTCTAT
TTACGCGCCT ATCCGAACTT GGACTTGACT AGCCTGCTAA TCAAAGTGGG TATTATCAAC
GGCACTGCTT ATGCGTTTGG CGTTTGGTTC GGTGGAGCAA TCACAGATAA ATGGGGTAAA
ACTAACAGAG GGGCGTACGG TTGGGTGCCT GCTCTTGGGC TTTTAGTTGG TGTGCCTGCA
TATATTTACT CTGTGCAGGT TACTGATTTA AACACGTCTC TGATACTGCT GACGGTGCTG
CTATTTACCA GTGGTTTTTA TTTGGGGCCA TCGTTTGCCT TGGCGCAAAC ACTGGCACCG
GTTAAGGTGC GTGCTATGTC GACTGCCTTA TTCTTCTTTG TCTTAAACAT TATTGCACTG
GGCGGTGGTC CTACTTTCAT CGGAATTTTG AGTAAATCGT TAACTGCTGA GCATGGTGAA
GTGGAAGCTT TGCGTTTATC CTTGTCGGCT GTTTCAGTAC CCTATGTTTT GGCTATTGTC
GCTTTCATAT GGACCGCTCG CAAAATCCCT GCTGATTGGG CTGCTGCAGA GAAACGTAAC
GGATAG
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| Protein sequence | MTVNTSESPV VQQEDFNQVS KPYRTYVLTI LTLVYAFNFI DRQIIGILSP FIKADLGLND
AQLGWLKGLY FAVLYTVVGI PIAWLADRYS RVNIVAISLT LWSGFTALSG MATTYTQLAI
ARIGVGIGEA GGSPPSHSIL SDLYPKEKRA GALAIYSLGI PFGIMLAFFA SAFILKGGDA
NWRLVMLSVG IPGVLLAILL KLTIKEPPRG GNLHSAAAKT PSWQSIKVLL TIPSWWGMCI
AISLASFGSY AISTWMMDFY LRAYPNLDLT SLLIKVGIIN GTAYAFGVWF GGAITDKWGK
TNRGAYGWVP ALGLLVGVPA YIYSVQVTDL NTSLILLTVL LFTSGFYLGP SFALAQTLAP
VKVRAMSTAL FFFVLNIIAL GGGPTFIGIL SKSLTAEHGE VEALRLSLSA VSVPYVLAIV
AFIWTARKIP ADWAAAEKRN G
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