| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2925 |
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| Symbol | |
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| ID | 4174691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3545934 |
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| End bp | 3547103 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055946 |
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| Product | isovaleryl-CoA dehydrogenase |
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| Protein accession | YP_662487 |
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| Protein GI | 109899232 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCTC CCTATCCAAC ACTGAACTTC GGCCTAGGTG AAGACATCGA TATGTTACGT
GACCACGTTT ATAACTTTGC TCAAGGGGAA ATCGCTCCTT TGGCTGAAAA GTCTGACATC
GACAACAGTT TCCCTAACCA GTTATGGCCA AAATTAGGCG AAATGGGACT GCTAGGTGTG
ACCGTGGCTG AACAATATGG TGGTTCCAAC ATGGGATATT TAGCCCACGT TGTCGCCATG
GAAGAGGTCA GCCGAGCATC CGCAGGAATA GGCTTGAGCT ATGGCGCTCA TTCCAATTTG
TGCGTCAATC AAATTCATAA AAATGGCTCA GATGCACAAA AAGAAAAATA CCTACCTAAG
CTTGTCAGCG GCGAGCATAT AGGTGCATTA GCAATGAGTG AGCCTAATGC TGGCTCAGAT
GTGGTAAGCA TGAAATTGCG GGCCGATAAA AAAGGTGACC ATTACGTGCT TAACGGCAAT
AAAATGTGGA TCACAAATGG CCCTGACGCT GACACTTACG TGATTTACGC CAAAACCGAT
ATAAGTGCAG GTTCAAAAGG CATGAGTGCT TTCATCGTTG AACGGGGCAC GCCAGGTTTC
AGCCAAGCAC AGAAGCTTGA TAAGCTTGGT ATGCGCTCAT CCAATACCTG CGAACTTGTA
TTTGAAGATT GCCCAGTACC AGCCGAGAAT TTAATTCGCA ATGAAGGCGA TGGTGCACGT
GTTCTGATGA GTGGCCTTGA TTATGAACGC CTCGTTCTCT CAGGTGGCCC TCTTGGCATT
ATGCAAGCCT GTATGGACTT AGTCGTACCT TACATTCATG ACCGCAAGCA GTTCGGTCAA
TCTATCGGCG AGTTCCAACT AGTTCAGGGT AAAGTTGCTG ATATGTATAC CCAAATGAAC
GCAGCGAGAG CTTATGTTTA TACAGTAGCT CGCGCTTGTG ATCGCGGCGA AACCACGCGT
AAAGATGCCG CTGCAGTCAT ACTGTATTCT GCCGAACTGG CGACTAAAAT GGCCCTCGAT
GCCATCCAAT TACTTGGTGG CAATGGGTAT ATCAATGAGT TTCCTGCCGG TCGTTTATTA
AGAGATGCAA AACTATACGA AATTGGAGCC GGTACCTCCG AAATCCGCCG CATGTTGATT
GGCCGAGAGC TATTTAAAGA GTCAGCGTAA
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| Protein sequence | MNAPYPTLNF GLGEDIDMLR DHVYNFAQGE IAPLAEKSDI DNSFPNQLWP KLGEMGLLGV
TVAEQYGGSN MGYLAHVVAM EEVSRASAGI GLSYGAHSNL CVNQIHKNGS DAQKEKYLPK
LVSGEHIGAL AMSEPNAGSD VVSMKLRADK KGDHYVLNGN KMWITNGPDA DTYVIYAKTD
ISAGSKGMSA FIVERGTPGF SQAQKLDKLG MRSSNTCELV FEDCPVPAEN LIRNEGDGAR
VLMSGLDYER LVLSGGPLGI MQACMDLVVP YIHDRKQFGQ SIGEFQLVQG KVADMYTQMN
AARAYVYTVA RACDRGETTR KDAAAVILYS AELATKMALD AIQLLGGNGY INEFPAGRLL
RDAKLYEIGA GTSEIRRMLI GRELFKESA
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