| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2913 |
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| Symbol | |
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| ID | 4174672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3529505 |
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| End bp | 3530230 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055927 |
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| Product | ABC transporter related |
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| Protein accession | YP_662475 |
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| Protein GI | 109899220 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAAAA CGTCCGCGAT TACAAAAACG GTTACTACGT CTCAGGGTGA ACTTTCGATC
CTCCAGCCAA TTAGTTTTGA AGTCAAGGCG GGTGAGTCGA TTGCCATTGT AGGTGCGTCC
GGCTCCGGTA AATCAACTTT ATTGAGCCTT CTAGCGGGGC TCGATGAAGT GAGTAGCGGA
AGCATCTATC TCGACGGTCA AGGGCTGCAT GATATGAATG AAGAGCAGCG AGCTCAACTA
CGCGGCGAAA AAGTCGGTTT TATTTTTCAA AGTTTTATGT TGGTTCAAAG TTTAACAGCG
CTGGAAAACA TCATGTTGCC TGCGGAAATT GCAGGATTGG ACAACGCCAA GCAACTTGGG
CAAGAAATAT TAGAGAAGGT CGGTCTGGGG CATCGCGGCG ATCATTATCC GAATCAATTA
TCGGGCGGTG AGCAGCAGAG GGTTGCCATT GCTCGCGCGT TTATCACAAA ACCCAAAATT
CTGTTTGCCG ACGAGCCTAC CGGTAATTTA GATGCTGCTA ACAGCGGTAA AATTGAACAG
TTACTCTTTG ATTTGAATCG GGATTCGCAC ACTACTTTAG TGTTGGTTAC CCACGATAAT
GAATTGGCAA AGCACTGTCA GCGCCAATTA TTGATGAACG CGGGTGAGCT TAGCGAAGTG
ACTGTTTCTA TTAAGAACAC TGATCCTATT GATGTATTAA CGCCCTCAGA AAGTCAGGCA
GGGTAA
|
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| Protein sequence | MIKTSAITKT VTTSQGELSI LQPISFEVKA GESIAIVGAS GSGKSTLLSL LAGLDEVSSG
SIYLDGQGLH DMNEEQRAQL RGEKVGFIFQ SFMLVQSLTA LENIMLPAEI AGLDNAKQLG
QEILEKVGLG HRGDHYPNQL SGGEQQRVAI ARAFITKPKI LFADEPTGNL DAANSGKIEQ
LLFDLNRDSH TTLVLVTHDN ELAKHCQRQL LMNAGELSEV TVSIKNTDPI DVLTPSESQA
G
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