| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2869 |
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| Symbol | |
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| ID | 4174628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3479649 |
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| End bp | 3482723 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055883 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_662431 |
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| Protein GI | 109899176 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00922852 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATATCG CCGAATACTC GATTAAACAC AAAGTCATTA GCTGGCTGTT TCTGACAATT
CTAACCTTAG GCGGCTTGTC AGCCTTCTAC GGCTTAGGCC GTTTGGAAGA CCCTGCATTC
ACGCTAAAAG ACGCCTTAAT TATTGCGACT TACCCTGGTG CGACACCGCA AGAAGTCGAA
GAGGAGCTGA CCTATCCACT AGAGCGTGAA ATTCGCCAAT TACCCTATAT CGATACTATT
ACCTCGATTT CTTCTGCTGG TATGTCTCAA CTCAAAGTCA GTATGAAGTC CATATATGGA
CCCGAAAGCC TGCCGCAAAT TTGGGATGAA ATGCGTCGTA AGATAAACGA TGTTCAGCCA
ACGCTTCCCA CAGGCGTGAG CTCTTTGCAG ATCCTTGATG ATTTTGGTGA CGTGTTCGGC
ATTATGATCA TGATCACCGG CGACGGATAC GACGCAGTTG AACTTAAGCG CTACGCGGAT
CAACTACGAC GGGAATTAGA GTTGGTGCAA GGCGTTGGTA AGGTGGCAAT CTCTGGCGAT
CAAACCGAGC AGCTTTTTGT CGAATTGTCC CTAGAGCGTT TAGCGTCACT TAACTTAGAC
ATGAGCACGG TCACTGGTTT ACTTAATCAG CAAAATAGCG TGCAGCAATC TGGCCAAATC
ATGGTCAATG GTCAGTCGCT TATCATCCGA CCTAGTGGCA CATTAAGTTC AGTAGAAGAG
CTTGAAAACC TCATTATTCA TGGCCGAGAC ACAGGTAACC TTATTCGTTT GAAAGATGTG
GCGAAAGTGT CACGGGGCAT TGCCGAGCGC CCAAATAATG TGGTGACGTT CAATGGTAGC
CAAGCAATAA GCTTAGGAAT TTCATTTTCC CCAGGGGTAA ATGTGGTTGA AATCGGTAAA
CATATCGAGC AAGAGTTTGA AGCATTGCAA AGTATTAAAC CGGCCGGAGT GGAGCTAGAT
TATTTCTATA ATCAAGCGAT AGAGGTTGAT AAATCCGTCA GTGATTTTGT GATAAGTCTG
GCACAGGCGG TAGGTATTGT GATTGTCGTC CTATTGTTTG CCATGGGCCT GCGCAGCGGG
ATCATAATCG GTACCGTGTT GCTGTTAACG GTTTTTGGTA CGTTCATGCT TATGAACTAC
AACGAGATTG AGCTACATCG TATCTCTCTT GGTGCATTGA TTATTGCCCT GGGCATGCTG
GTGGATAACG CCATTGTCGT TGTTGAAGGT ATATTGGTAG GGCTCAAAAA AGGTCGTACC
CGATTGCAAG CTTCAAAGGA TATCGTCACG CAAACACAGT GGCCTTTGCT TGGGGCTACC
GTTATCGCTA TAGCTGCATT TGCGCCCATT GGGTTGTCAA AAGATGCCAC CGGTGAGTTT
ATGGGATCGC TGTTTTGGGT ATTGTGTTAT TCGCTATTTT TAAGCTGGAT AACCGCGCTG
ACCCTAACGC CATTTTTAGC CAATCTACTG CTTAAAGAAA AGCCACAAAG TACTGATGGC
AGTCAGAATG ACGACGAAGA AGACGATGCT TACAAAGGGG CATTGTTTGT TGTTTTTGGC
TCGATGCTGA GATTTGCCCT GCGTTTTCGT TGGGCCACGG TCGCATCTAT GGTCGTTTTA
TTAGTGGTGG CTGTGATTGG TTTTGGCAAC GTGAAGCAAT CGTTCTTTCC TGCTTCTAGC
ACGCCTATGT TTCATGTTGA TGTGTGGATG CCACAAGGGA CTGATATTCA GCAAACGATT
AAACAGAGCG CTGAGGTAGA AGCGTATTTG GGGTCTTTGG AGCATGTTGA TTTTGTTGCC
TCCACTGTAG GCCAAGGTAT GCAGCGCTTT ATGTTGACCT ATCAGCCTGA GCAAAGTTAC
GCGGCGTTTG CGCAAATGAC CGTGCGCGTT GACACCCGGG AAAACATGTT TTTACTACTA
GATGGTTTGG AAGCTGACTT GAATAAAAAC TTTGCGCATC CCACCTTTCG CCTAAGGGTA
ATGGAATTTG GTCCCACTCC AGGGTCGAAG ATTGAAGCAA GGATCACAGG CTCAGATCCA
GACATATTAC GTTCGCTTGC CGTACAAATA GAGGATGAGT TTAATGCCGA TCCTGGTGCG
CGAAATATTC GTCATGACTG GCGCGAACGT ACCAAAGAGC TGGTGCCTCA GTTTAATGAA
TCAAAAGCAC GGCGGTTGGG CATTTCTAAG CAAGACTTAT CAAGTACTTT GCAAATGGCA
TTTGGTGGTA ACACCATAGG TATTATTCGT GATGGTACGC ATATGTTGCC TGTGATCACA
CGCTTACCGC AAGAAGAGAG GGTGGATTTT GAATCTTTAG AGAATCTAAA TATTTGGAGC
CCTACCTTGC AAACATACAT ACCCATCGAG CAAATTATTG ATGGTGTAAA AATGGAGTGG
ATCGATCCGC TTATTTTACG CCGAGATAGG AAGCGTACCT TAACCGTTAT GGCTGATCAC
GATGTGTTGG GGGATGAAAC CGCAGCGTCT TTGTTTGCCC GTCTACGCCC TAAGGTTGAG
GAAATAACAT TACCTGAAGG CTATGAGTTA TCGTGGGGAG GAGAGTACGA GTCCACCAAT
GATGCTCAAG CGGCGATGTT TTCGTCTTTA CCTTTGGGGG CATTGGTGAT GTTTATCATT
ACTGTCTTTT TGTTTAATTC AGTGCGTAAA CCGCTGGTCA TTTGGTTTAC CGTGCCTTTG
GCTATCATAG GCGTGTCTAT GGGGTTACTG GCCACAGGTT TACCCTTTAG CTTTACTGCC
TTGCTTGGCT TACTTAGCCT GAGCGGGATG ATTTTGAAAA ATGGCATTGT ATTGATGGAC
CAGATAAACA TAGAACTTGC CACAGGCAAG GATGCGTATA AGGCGGTGGT CGACAGTGCA
CTTAGTCGTG TACGACCCGT CAGTATGGCC GCCATGACGA CCATTTTAGG CATGGTGCCA
CTGATGTTTG ATCCTTTCTT TGGCTCTATG GCAATTACTA TTATGGCGGG TCTGGGCTTT
GCGACGGTAT TAACCCTTAT TGTGGTGCCA GTGTTGTTTT CTATATTTTA TAAAGTGCAA
CCCGGTAGCG CGTAA
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| Protein sequence | MNIAEYSIKH KVISWLFLTI LTLGGLSAFY GLGRLEDPAF TLKDALIIAT YPGATPQEVE
EELTYPLERE IRQLPYIDTI TSISSAGMSQ LKVSMKSIYG PESLPQIWDE MRRKINDVQP
TLPTGVSSLQ ILDDFGDVFG IMIMITGDGY DAVELKRYAD QLRRELELVQ GVGKVAISGD
QTEQLFVELS LERLASLNLD MSTVTGLLNQ QNSVQQSGQI MVNGQSLIIR PSGTLSSVEE
LENLIIHGRD TGNLIRLKDV AKVSRGIAER PNNVVTFNGS QAISLGISFS PGVNVVEIGK
HIEQEFEALQ SIKPAGVELD YFYNQAIEVD KSVSDFVISL AQAVGIVIVV LLFAMGLRSG
IIIGTVLLLT VFGTFMLMNY NEIELHRISL GALIIALGML VDNAIVVVEG ILVGLKKGRT
RLQASKDIVT QTQWPLLGAT VIAIAAFAPI GLSKDATGEF MGSLFWVLCY SLFLSWITAL
TLTPFLANLL LKEKPQSTDG SQNDDEEDDA YKGALFVVFG SMLRFALRFR WATVASMVVL
LVVAVIGFGN VKQSFFPASS TPMFHVDVWM PQGTDIQQTI KQSAEVEAYL GSLEHVDFVA
STVGQGMQRF MLTYQPEQSY AAFAQMTVRV DTRENMFLLL DGLEADLNKN FAHPTFRLRV
MEFGPTPGSK IEARITGSDP DILRSLAVQI EDEFNADPGA RNIRHDWRER TKELVPQFNE
SKARRLGISK QDLSSTLQMA FGGNTIGIIR DGTHMLPVIT RLPQEERVDF ESLENLNIWS
PTLQTYIPIE QIIDGVKMEW IDPLILRRDR KRTLTVMADH DVLGDETAAS LFARLRPKVE
EITLPEGYEL SWGGEYESTN DAQAAMFSSL PLGALVMFII TVFLFNSVRK PLVIWFTVPL
AIIGVSMGLL ATGLPFSFTA LLGLLSLSGM ILKNGIVLMD QINIELATGK DAYKAVVDSA
LSRVRPVSMA AMTTILGMVP LMFDPFFGSM AITIMAGLGF ATVLTLIVVP VLFSIFYKVQ
PGSA
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