Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2864 |
Symbol | |
ID | 4174623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3473785 |
End bp | 3474825 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055878 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_662426 |
Protein GI | 109899171 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000516342 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATATAA AACGCATTGT GCTTCTTACT GTTTATGCCC TCATTGCTGT GGCCAGTATG GTGGGTATTA TTAACGCCAA TTCTGATCGC GCTGAATTTA TCATCAAGGC GTCTATTCAA GCATCGACTC AAGATGAAGA TTATGTGGGC TTACTGGCGT TTAAAGAATA CGTAGAGCAA GCAAGTGAAG GCCGAGTTCA AGTTCAGCTT TATTCCTCGG GCCAGTTTTG TGGCGGCGTG CCTGAGTGTA TTGGTAACTT ACAAAAAGGC GTGCTCGAAA TGTTTCCTAC CACGGCAGGC GGCACAGGAA ATTTTTTCGC GCCTGCTCAA GTTCTCGATT TGCCTTATGT TTTTGATAAC GACAAGCAAG CCCAGTGCGT ACTCGACGGG CCTATTTTAA GCAAAATGCG CAGCACCGTT TTAGACCGAA ACCTGCAAAT TCGCCTAATG GGTGTGACCA ACACTGGCGG CTGGCGTAAT TTCGCTACCA CCAGCAAAGC CATTCATCAT CCAAGAGATT TAATCGGACA AAAAATACGC ACTACGCCGG CTAAAATACA GCAAGAGCTT GTGCGGCAAT TGGGCGCAAA CCCGACGCCG GTTTCATGGG CTGAGCTCTA CACTGCACTG GCAACAGGCG TGGTAGAGGG CAGTAAAAAC GGTATTCAAG ATATTATTGG GGCTAAATTA GAAGAGCATT TGAAATACAT AGTGCTGGAT GGGCATTCGT ATATGGCGGC GTTATGGTGG TTCTCTGAGC CCGTTTGGCA ATCATTACCT AAAGATATTC AAGGCATTAT AGAACAAGGT TTTGTACGCC AGCAAAAAGC AGCAAATGAT TTGGTATTTA ATCAAGAAGC CAACTCATAC ACGTTGTTTG AAAAAGCAGG TGGTACGGTT TATCGCCCGT CTCCAAGCGA AAAACAAGCT TTCAAAGATG CTTCAAAAAA TATGCGTCAG TGGTTTAAAG ATAATTACGG CGATGATTGG CTCACGTTGC TGGAAACCTC TGTGGCGCAA TGTGCTACAA ACGCTAGCTA A
|
Protein sequence | MNIKRIVLLT VYALIAVASM VGIINANSDR AEFIIKASIQ ASTQDEDYVG LLAFKEYVEQ ASEGRVQVQL YSSGQFCGGV PECIGNLQKG VLEMFPTTAG GTGNFFAPAQ VLDLPYVFDN DKQAQCVLDG PILSKMRSTV LDRNLQIRLM GVTNTGGWRN FATTSKAIHH PRDLIGQKIR TTPAKIQQEL VRQLGANPTP VSWAELYTAL ATGVVEGSKN GIQDIIGAKL EEHLKYIVLD GHSYMAALWW FSEPVWQSLP KDIQGIIEQG FVRQQKAAND LVFNQEANSY TLFEKAGGTV YRPSPSEKQA FKDASKNMRQ WFKDNYGDDW LTLLETSVAQ CATNAS
|
| |