| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2864 |
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| Symbol | |
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| ID | 4174623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3473785 |
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| End bp | 3474825 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055878 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_662426 |
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| Protein GI | 109899171 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000516342 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAA AACGCATTGT GCTTCTTACT GTTTATGCCC TCATTGCTGT GGCCAGTATG
GTGGGTATTA TTAACGCCAA TTCTGATCGC GCTGAATTTA TCATCAAGGC GTCTATTCAA
GCATCGACTC AAGATGAAGA TTATGTGGGC TTACTGGCGT TTAAAGAATA CGTAGAGCAA
GCAAGTGAAG GCCGAGTTCA AGTTCAGCTT TATTCCTCGG GCCAGTTTTG TGGCGGCGTG
CCTGAGTGTA TTGGTAACTT ACAAAAAGGC GTGCTCGAAA TGTTTCCTAC CACGGCAGGC
GGCACAGGAA ATTTTTTCGC GCCTGCTCAA GTTCTCGATT TGCCTTATGT TTTTGATAAC
GACAAGCAAG CCCAGTGCGT ACTCGACGGG CCTATTTTAA GCAAAATGCG CAGCACCGTT
TTAGACCGAA ACCTGCAAAT TCGCCTAATG GGTGTGACCA ACACTGGCGG CTGGCGTAAT
TTCGCTACCA CCAGCAAAGC CATTCATCAT CCAAGAGATT TAATCGGACA AAAAATACGC
ACTACGCCGG CTAAAATACA GCAAGAGCTT GTGCGGCAAT TGGGCGCAAA CCCGACGCCG
GTTTCATGGG CTGAGCTCTA CACTGCACTG GCAACAGGCG TGGTAGAGGG CAGTAAAAAC
GGTATTCAAG ATATTATTGG GGCTAAATTA GAAGAGCATT TGAAATACAT AGTGCTGGAT
GGGCATTCGT ATATGGCGGC GTTATGGTGG TTCTCTGAGC CCGTTTGGCA ATCATTACCT
AAAGATATTC AAGGCATTAT AGAACAAGGT TTTGTACGCC AGCAAAAAGC AGCAAATGAT
TTGGTATTTA ATCAAGAAGC CAACTCATAC ACGTTGTTTG AAAAAGCAGG TGGTACGGTT
TATCGCCCGT CTCCAAGCGA AAAACAAGCT TTCAAAGATG CTTCAAAAAA TATGCGTCAG
TGGTTTAAAG ATAATTACGG CGATGATTGG CTCACGTTGC TGGAAACCTC TGTGGCGCAA
TGTGCTACAA ACGCTAGCTA A
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| Protein sequence | MNIKRIVLLT VYALIAVASM VGIINANSDR AEFIIKASIQ ASTQDEDYVG LLAFKEYVEQ
ASEGRVQVQL YSSGQFCGGV PECIGNLQKG VLEMFPTTAG GTGNFFAPAQ VLDLPYVFDN
DKQAQCVLDG PILSKMRSTV LDRNLQIRLM GVTNTGGWRN FATTSKAIHH PRDLIGQKIR
TTPAKIQQEL VRQLGANPTP VSWAELYTAL ATGVVEGSKN GIQDIIGAKL EEHLKYIVLD
GHSYMAALWW FSEPVWQSLP KDIQGIIEQG FVRQQKAAND LVFNQEANSY TLFEKAGGTV
YRPSPSEKQA FKDASKNMRQ WFKDNYGDDW LTLLETSVAQ CATNAS
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