Gene Patl_2837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2837 
Symbol 
ID4174597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3438192 
End bp3439154 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content43% 
IMG OID638055853 
Producthypothetical protein 
Protein accessionYP_662401 
Protein GI109899146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTACC CTGTATTAAG TGTCGTTGCG ACGCTATTCG TTGTGATATG TGCGACAAGC 
GCAGAAGCCT CTTCAGGTTC AATCGGGGCT TATAACCTCA TACTTCTTGA GGATTATGAC
TTCAACGGTG GCGACGTAGA AGGTAAATCA ATTATCGGTG GCAATTTGAA TGCGGCCGGT
AAAGCAGTCG AATTTGGCAG TCGCCTACCT GATACAAATA GTGCAATTGA TGCGGTGACG
ATTGTGGGTG ATATTAATGC CAATCACGTT ACGATCCAAA ATGGCAACAA CATTGTTTAT
GGTTCAAACT CGAGTCATGC AAATTTCAAT CTAAACGGAA GTGGCGGTTC TGCATTACAA
CGTTCACAGA CTGAGCTTGA ATCTGAAATC GCAGCCGTAT TTACTGATAT ATACAACGAC
AGCTTATATT TTAATAGCCT AGCTACGAAT GGCTCGTTTT CGGGTCCCGG TAATCAATCT
TCACTTTCAT TTTCTGGAAG TGAGAGTGTC GCAGTATTTA ACGTAAATGC GTCTGATGTC
TTTGCACAAA ATAATTCGTT AAGTTTGCAA CAAGCATCTG CGTCAACGGT TGTGATTAAT
GTTGCAGGTA CTGATATTAC AGCAGGCGGC GGTGTGAATC TGACCAATGG TTTTAGCCAA
CAAACGGCGA CTAACATCGT TTGGAATTTT TTCGAGGCCA CAACCATTAA TTTTAATAAC
TTAGCGCTAA AAGGCTCAGT CCTAGCTCCC TATGCTGATA CCACAGGCGG TTCTTCTTTT
GATGGTGCCT TTGCAGCAGT TTCTTATACT GGGGCTCGAG AGTTTCATAA TTTCCTTTTT
GATTATGATA CGCCGAAGCC AACGCCTCCA ACCACTCAAG TTAATGCCCC TGCATCGTTA
GCGCTATTTG CTTTAGGTCT TGGGCTAGTT TTTAGAACTC GGCGGAATCG TCAACGTAGT
TAA
 
Protein sequence
MKYPVLSVVA TLFVVICATS AEASSGSIGA YNLILLEDYD FNGGDVEGKS IIGGNLNAAG 
KAVEFGSRLP DTNSAIDAVT IVGDINANHV TIQNGNNIVY GSNSSHANFN LNGSGGSALQ
RSQTELESEI AAVFTDIYND SLYFNSLATN GSFSGPGNQS SLSFSGSESV AVFNVNASDV
FAQNNSLSLQ QASASTVVIN VAGTDITAGG GVNLTNGFSQ QTATNIVWNF FEATTINFNN
LALKGSVLAP YADTTGGSSF DGAFAAVSYT GAREFHNFLF DYDTPKPTPP TTQVNAPASL
ALFALGLGLV FRTRRNRQRS