| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2806 |
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| Symbol | |
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| ID | 4174566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3406323 |
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| End bp | 3406919 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055823 |
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| Product | Slp family outer membrane lipoprotein |
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| Protein accession | YP_662371 |
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| Protein GI | 109899116 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3065] Starvation-inducible outer membrane lipoprotein |
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| TIGRFAM ID | [TIGR00752] outer membrane lipoprotein, Slp family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0323453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACACTA AAATCGGTTT CCTATTCGTT ACTTTGTGGT TAGCGGGTTG TTCAACACTT
CCTGAACAAA TTCAGTTGCC TGATGAAACA AACTTGATTA CTTATCAAGA AGCCGCTTCA
AAGTCCAAAG AGGTATTGGG CCAGAAAGCC CGCTGGGGCG GGATTATCGC TAAGGTAGAA
AATAAACCCA ACGATACCCT AATCGAAATG GTTTACTACC CGTTACGCAG TTATGGCCGT
CCACTACAAA GTGATGAGAG TATCGGGCGT TTTAGGGTTT ACGTGAATGG CTTCTTAGAT
CCTATGGTGT ACAAAAAAGG TCGAACCATG ACCTTTACCG GTGATTTTGT TCGTTTAGAG
AAAGGTATGG TAGGCGAGCA TGAGTACGTA TTCCCAACAC TTGCTTCAAC TGGCTATTAC
TTATGGAAAG AGATTCAGCA AGTTGATATG AATATGATCA GCGTTTGGCC TTATGATTAC
TGGCGATACG GTTGGTATAA TCGCCCGTTT AATAATCGAG TGTTTTTACG CAGCACTCAT
CGCACTAGAA GTAGCCCGGC GAGCTCTAAA CCCTCTGCTA AAACCAAGAG CAATTAG
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| Protein sequence | MYTKIGFLFV TLWLAGCSTL PEQIQLPDET NLITYQEAAS KSKEVLGQKA RWGGIIAKVE
NKPNDTLIEM VYYPLRSYGR PLQSDESIGR FRVYVNGFLD PMVYKKGRTM TFTGDFVRLE
KGMVGEHEYV FPTLASTGYY LWKEIQQVDM NMISVWPYDY WRYGWYNRPF NNRVFLRSTH
RTRSSPASSK PSAKTKSN
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