| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2805 |
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| Symbol | |
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| ID | 4174565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3405260 |
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| End bp | 3406207 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055822 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_662370 |
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| Protein GI | 109899115 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.011133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCAA AAAGTACCCT ACACAAGAGC ACCCAAGAAA AGAGCACGAC AGCAGTAAGG
TCACAAGAAC TAAGCTCACA ACAATTAAGT ACATTAGAAG CCAATGTGAG TGACGTGGAA
TTTCCTTTAC GAAATATCAC GCTGCGTGGC CTAGCGTCCG GTGACCCGTC AAAACCGTTA
ATCGTTGCCC TGCATGGTTG GCTTGATAAT GCCGCCACCT TTAAACCTCT GGCTGAATAT
TTATCGGATT ATTATGTCAT TGCACTGGAT TTCGCTGGTC ACGGTAAATC CGATCATCGC
AGTAAAGATG CACATTATCA TTTGGTGGAT TTTGTTTACG ATGTGCATGA AGTTGTTGAA
ACGCAAGGCT GGGATAATTT CATTTTACTT GGGCACTCTA TGGGCGGAAT TGTCGGCTCA
ATGTACACCA GTTGCTTTCC CGAGAGAGTG AGTAAGTATA TTACGATTGA ATCTTTAGGG
CCTGTTACTA AAGACAGTGA AAGCAGTCCT GAGCAATTAC GCGAATCCAT TGAAAGCCGG
CTCAAAGGTG CAGCAAGTGA AGGTAAGCAC CCGAGCAATA AGCAAAGCGT GATCCGCGCA
AGAGCGATCG CGGGTGGTTT TTCTGATGAG TGCGCTCGTT TATTAGTTGA GCGAAATCTG
TGTGAAGTAG AGGGGAAACT TGAATTCACC ACTGACAGGC GCCTGAGAAC ATTTTCTTCA
TTACGATTGA CCGAAGGCCA AGCGCAAGCG TTTTTAAAAG CTATTACTTG TCCGACCATT
GTAATCATTG CTGATAACGG CTACGAAATT ATGAAGAAAA CCGCCGAATT ACGAATAAAC
TTGTTAAAAG ATGCAAAATT ACTCAGCGTT GTGGGCTCAC ATCATCCACA TTTGGATAAT
ACGCAATCAG TTTCTGAGCA TATTTTGCAC TTCCTTCGCG AAAATTAA
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| Protein sequence | MQAKSTLHKS TQEKSTTAVR SQELSSQQLS TLEANVSDVE FPLRNITLRG LASGDPSKPL
IVALHGWLDN AATFKPLAEY LSDYYVIALD FAGHGKSDHR SKDAHYHLVD FVYDVHEVVE
TQGWDNFILL GHSMGGIVGS MYTSCFPERV SKYITIESLG PVTKDSESSP EQLRESIESR
LKGAASEGKH PSNKQSVIRA RAIAGGFSDE CARLLVERNL CEVEGKLEFT TDRRLRTFSS
LRLTEGQAQA FLKAITCPTI VIIADNGYEI MKKTAELRIN LLKDAKLLSV VGSHHPHLDN
TQSVSEHILH FLREN
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