Gene Patl_2792 details

Gene Information

• Locus tag: Patl_2792
• ID: 4174552
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 3389497
• End bp: 3391422
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 638055809
• Product: glucosyltransferase MdoH
• Protein accession: YP_662357
• Protein GI: 109899102
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2943] Membrane glycosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAATAA ATATTAAGGG TAAGGCCGTC CGTAAGTGGA TATATGCATT AATGGTGTTT 
GTCACCTCTA TTGCGGGCAG CTGGATGATG TACGAAATCT TTTCAGAAAG CGGTATCACC 
GTGCTTGAAG TAATTTTGTT GGTGCTGTTT AGTATTACTT TTTTGTGGAT CTCTGCCGCG 
TTTTGGAGCG CCTTTATCGG TTTCATCCTG CAGATATTCG ATATTGACCC GCTGAAGCTT 
AAGCGCAATA AACATTTTGC TGGCCAATTG GACAACGTCA TTGTGAAAGA CAGGCATGCT 
GTCGTCATGC CCGTATACAA CGAAGACACA GATCGCATCA TGGCGGGCTT CGAGGCGTGC 
TTGGTTGATT TACAGCGCAC AGGTCAGCTG GAGCACTTTG ACTTTTATAT GTTAAGTGAC 
ACTCAGAATC CCGATATGGC GCAAGCTGAA CTTACCGCGT GGAATGAGCT TTGTCAGCGC 
GTAGGGGCAT TATCTGAGAA TATCTATTAC CGACGCCGAG AACAAAATAC CCATCGTAAA 
GTGGGTAACT TGGCCGATTT TTGTCAGCGC TGGGGTTACC AGTACGAGTC AATGATCGTA 
CTCGATGCTG ATAGCGTGAT GACGGGTGAG TGCATGTTGA CGCTAGTGAA AGCAATGCAA 
CAAAACCCGA TGTCAGGTTT AATTCAAACC GTGCCTATCC CAGTGCGTTC ACAAACCTTG 
TTTGGGCGGT TTCTGCAGTT CGCATCGTGC TTATATTGCC CCATGCTGGC AACCGGTCAG 
GCATTCTGGC AAACCGACAG CGCAAACTAC TGGGGACATA ATGCCATTAT CCGTGTGGAC 
GCATTTATTC AACATTGTGG TTTACCTACA TTAGCGGGTA AAGCGCCTTT TGGTGGCGAC 
ATACTCAGCC ATGATTTTGT CGAAGCTGCG CTGTTAAGAC GTGCAGGATG GGACGTACTA 
TTACTAGCCG ATTTAGAGGG CAGTTACGAA GAAATCCCCA GTAATATTAT CGATTACGCC 
ACACGAGACA GGCGTTGGGT GCAAGGCAAT ATTCAGCACC TTGGCATTAT CAATGGTAAG 
GGGTTGCACA CGGTAAATCG CCTGCATTTT CTCTTTGGTG CGTTAGCTTA TATGTCGTCA 
TTAGTGTGGT TGGTGATGTT AGTACTAAGC ACAATAGACG CCGTCGTACG CGCGACCACA 
GAAACGGTGT TTTTTGCTTC CAATTATTCT TTATTTCCCT CGTGGCCTGT GGTCAAAACT 
GAATACATTA TTACATTGCT AAGTGCCACT GTGGTCATGC TATTGGGGCC AAAGTTACTG 
GGCGCTATTG TGGCTTTGGT TAGGCGCAGA GAGCAATTTG GCGGCGGATT AGCATTAATG 
TCCGGGGCGC TAATTGAAGC GACTATCGCC ATTATCATTG CCCCATTAAT GATGTTTTAT 
CACGCCTATT TTGTACTTAA TGTTCTTGTT GGAAAGAATG TCAGCTGGGA TGCACAGGGC 
AGAGAAGGTC GCATGGTGCC GTGGAAAGAA GCCTTTAAGC GTACTTGGGT GGCCAGTGCT 
ATTGCCATCG CGTGGGGCGG GATTACGTTA TCTCTAACGC CTATTTTATT TTGGTGGTTG 
GCCCCTGTGC TACTCGGTTT GTTACTTGCT GCCCCAATTA TTCGATTTTC CAGCAGTTTG 
TATCTTGGCA AATTGAGCCG CAGTTTGGGG ATGTTTGTCA GCCCGAGCGA GGTCGAGGAA 
ATCCCGGCGC TGCGTACACT TAGGATCCGC CTAGCCAACA TGCAGCATCA AGACGAAATA 
TTGTTATCTA GCCCGCCCAT GCCGCCGGAA CAGTGGCAAG AGATGCCAGA GCAAAGTTTT 
GAGTTCTTGT CATCAAGTGT AGAAATGCCG ATACAGCGAC TGGCGAGTGA TAACAAACAA 
CAGTAA 

 

Protein sequence

MLINIKGKAV RKWIYALMVF VTSIAGSWMM YEIFSESGIT VLEVILLVLF SITFLWISAA 
FWSAFIGFIL QIFDIDPLKL KRNKHFAGQL DNVIVKDRHA VVMPVYNEDT DRIMAGFEAC 
LVDLQRTGQL EHFDFYMLSD TQNPDMAQAE LTAWNELCQR VGALSENIYY RRREQNTHRK 
VGNLADFCQR WGYQYESMIV LDADSVMTGE CMLTLVKAMQ QNPMSGLIQT VPIPVRSQTL 
FGRFLQFASC LYCPMLATGQ AFWQTDSANY WGHNAIIRVD AFIQHCGLPT LAGKAPFGGD 
ILSHDFVEAA LLRRAGWDVL LLADLEGSYE EIPSNIIDYA TRDRRWVQGN IQHLGIINGK 
GLHTVNRLHF LFGALAYMSS LVWLVMLVLS TIDAVVRATT ETVFFASNYS LFPSWPVVKT 
EYIITLLSAT VVMLLGPKLL GAIVALVRRR EQFGGGLALM SGALIEATIA IIIAPLMMFY 
HAYFVLNVLV GKNVSWDAQG REGRMVPWKE AFKRTWVASA IAIAWGGITL SLTPILFWWL 
APVLLGLLLA APIIRFSSSL YLGKLSRSLG MFVSPSEVEE IPALRTLRIR LANMQHQDEI 
LLSSPPMPPE QWQEMPEQSF EFLSSSVEMP IQRLASDNKQ Q