Gene Patl_2752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2752 
Symbol 
ID4174512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3342343 
End bp3343125 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content48% 
IMG OID638055769 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_662317 
Protein GI109899062 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACAG TCACCTTGAA TATAAAGGGA AAAGTCGCTT ATTTACGCCT TAACAGAGCT 
GAAAAGTACA ATGCGTTAAC CCAAGACATG TGGCATGCCA TTGCGGATGC ATGCGATGTG
TTAGGTCAGG ACCAATCAAT ACGCGTTTTA GTGCTAGGTG CACAGGGTGA CAAAGCGTTT
TGCGCCGGCG CAGATATACA AGAATTACAT AGTATGCTGA GCAACCCAGA TGCCTTTGCT
GCTAGCAACG AAATAGTGCA ATTAACCCAG CAAAAACTTG CAGCCTTACC CTTTGCGACA
ATTGCACAAA TCAATGGTGT GTGTGTGGGC GGGGGCATGG GGCTGGCGAT GTGTTGTGAT
TTTCGTATTG CCGCTAACAA TGCAAGCTTC GCGATCACGC CTTCTAAACT AGGGTTGCTA
TACAGTTTGG CAGATACCCA GCGCTTAGCG GATATAGTGG GCTTGCCTCG AGCCAAAGAG
CTGCTTTACC TAGGCAAAAA AATTGATGCA AACACGGCTG CCAGTTGGGC ATTGGTGACC
GAGGTGGTCG AGCGTGAAGC GCTCAGTGCT GCAACCGACG CATTAATCGC GCAGATATTG
AGTGTGAGCG GCTACTCGAT TAGCGGTACA AAACGCACGC TAACCCATGT TAGCCAAGCA
AATGCACAAG CTTCGGATAA TAAAGCTGCG CTAGAGCAGT TATTTGATGA TGCGTTTCAT
GGTAAAGATT TCAAGGAAGG TGCAGCCGCC TTTGTTGAAA AGCGCACTGC GAGATTTTTA
TAA
 
Protein sequence
MSTVTLNIKG KVAYLRLNRA EKYNALTQDM WHAIADACDV LGQDQSIRVL VLGAQGDKAF 
CAGADIQELH SMLSNPDAFA ASNEIVQLTQ QKLAALPFAT IAQINGVCVG GGMGLAMCCD
FRIAANNASF AITPSKLGLL YSLADTQRLA DIVGLPRAKE LLYLGKKIDA NTAASWALVT
EVVEREALSA ATDALIAQIL SVSGYSISGT KRTLTHVSQA NAQASDNKAA LEQLFDDAFH
GKDFKEGAAA FVEKRTARFL