Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2752 |
Symbol | |
ID | 4174512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3342343 |
End bp | 3343125 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638055769 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_662317 |
Protein GI | 109899062 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAACAG TCACCTTGAA TATAAAGGGA AAAGTCGCTT ATTTACGCCT TAACAGAGCT GAAAAGTACA ATGCGTTAAC CCAAGACATG TGGCATGCCA TTGCGGATGC ATGCGATGTG TTAGGTCAGG ACCAATCAAT ACGCGTTTTA GTGCTAGGTG CACAGGGTGA CAAAGCGTTT TGCGCCGGCG CAGATATACA AGAATTACAT AGTATGCTGA GCAACCCAGA TGCCTTTGCT GCTAGCAACG AAATAGTGCA ATTAACCCAG CAAAAACTTG CAGCCTTACC CTTTGCGACA ATTGCACAAA TCAATGGTGT GTGTGTGGGC GGGGGCATGG GGCTGGCGAT GTGTTGTGAT TTTCGTATTG CCGCTAACAA TGCAAGCTTC GCGATCACGC CTTCTAAACT AGGGTTGCTA TACAGTTTGG CAGATACCCA GCGCTTAGCG GATATAGTGG GCTTGCCTCG AGCCAAAGAG CTGCTTTACC TAGGCAAAAA AATTGATGCA AACACGGCTG CCAGTTGGGC ATTGGTGACC GAGGTGGTCG AGCGTGAAGC GCTCAGTGCT GCAACCGACG CATTAATCGC GCAGATATTG AGTGTGAGCG GCTACTCGAT TAGCGGTACA AAACGCACGC TAACCCATGT TAGCCAAGCA AATGCACAAG CTTCGGATAA TAAAGCTGCG CTAGAGCAGT TATTTGATGA TGCGTTTCAT GGTAAAGATT TCAAGGAAGG TGCAGCCGCC TTTGTTGAAA AGCGCACTGC GAGATTTTTA TAA
|
Protein sequence | MSTVTLNIKG KVAYLRLNRA EKYNALTQDM WHAIADACDV LGQDQSIRVL VLGAQGDKAF CAGADIQELH SMLSNPDAFA ASNEIVQLTQ QKLAALPFAT IAQINGVCVG GGMGLAMCCD FRIAANNASF AITPSKLGLL YSLADTQRLA DIVGLPRAKE LLYLGKKIDA NTAASWALVT EVVEREALSA ATDALIAQIL SVSGYSISGT KRTLTHVSQA NAQASDNKAA LEQLFDDAFH GKDFKEGAAA FVEKRTARFL
|
| |