| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2714 |
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| Symbol | |
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| ID | 4174474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3307704 |
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| End bp | 3308894 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638055732 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_662280 |
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| Protein GI | 109899025 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAC TTCCCCTTGA TGGTGTACGA ATTATAGCCG TTGAACAATA CGGCGCAGGC
CCTTACGGCT CTATGTATTT AGCAGACTTG GGAGCAGAGG TGATCAAAAT TGAAAACCCT
GCCATTGGAG GGGATGTTTC TCGTCAAACC GGGCCGTTTT TTCTAGGTGA AAACGACAGC
TATTTTTACC AAACTTTTAA TGTAAACAAG AAAAGCCTGA CCCTGAATTT GAAATCAGAA
GAAGGGCGAA AAGTGTTCGA AAAACTGGTT AAAACCGCCG ATGCCGTGAC CAACAATTTA
CGTGGCGATC AGCCACAAAA ATTGGGAATT ACCTACGAGC AGTTAAAGCA CATTAACCCG
AAAATAGTTT GCGGGCATTT ATCCGCCTAT GGCCGAGACA ACGACCGCGC CAGTTGGCCG
GGGTATGATT ATTTAATGCA AGCCGAAGCG GGTTTAATGT CTCTCACTGG CGAGCCAGAT
CAGGCGCCAA CACGCTTTGG GGTGTCCATG GTGGACTTTA TGACAGGTGC TGTCGCTTCA
TTAGGTTTAA CCGCCGCTAT GTTAGGGGCT CACCGCACGG GTCAGGGGCG AGACGTAGAT
GTATCCCTGT TCGATGTAGC GCTTCATCAG CTATCTTACC CGGCTACTTG GTACTTAAAC
GAAAGTCATG TGGTGCAGCG CGTTGCGCGC TCGGCGCACC CAGCCACAGT GCCGTGTCAG
CTGTATAAAA CCCAAGACAG TTTCGTATTT CTGATGGCCA TGACGGATAA GTTTTGGGAT
GTGCTAGTTG ATATCCTCGA TGATGAAGTG CTTAAAGAAT CACGTTTTGC CCAAGTGGCA
GGACGGCGTG AAAATCGCGA TGTGCTGACC ACTGAAATCG ATCGCGTCTT GGCTGCTCAT
CCCACTGCAC ATTGGTTGGA AGTGCTAAAA GGGCGTATTC CTTGTGCGCC GGTTTACGAT
GTACCAGAAG CGTTGAATAA CCAGTACATT CGAGACATTG GCATGGTGCA AAGTGTGCCT
CATCCCCAGA ATGAAAAAAT GGAAATACTG GCTAATCCGA TCAAGCTTGA TGGTCAGCGG
TTAAGCGGAA ACGCCGCCGT GCCTATGGGC ACAGATACCC AAGATTTACT CAATGAGTTG
GGCTACAACC AAGCTGACAT CGCTGAGCTT AGCGCTAATA AAGCCGTATA A
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| Protein sequence | MTQLPLDGVR IIAVEQYGAG PYGSMYLADL GAEVIKIENP AIGGDVSRQT GPFFLGENDS
YFYQTFNVNK KSLTLNLKSE EGRKVFEKLV KTADAVTNNL RGDQPQKLGI TYEQLKHINP
KIVCGHLSAY GRDNDRASWP GYDYLMQAEA GLMSLTGEPD QAPTRFGVSM VDFMTGAVAS
LGLTAAMLGA HRTGQGRDVD VSLFDVALHQ LSYPATWYLN ESHVVQRVAR SAHPATVPCQ
LYKTQDSFVF LMAMTDKFWD VLVDILDDEV LKESRFAQVA GRRENRDVLT TEIDRVLAAH
PTAHWLEVLK GRIPCAPVYD VPEALNNQYI RDIGMVQSVP HPQNEKMEIL ANPIKLDGQR
LSGNAAVPMG TDTQDLLNEL GYNQADIAEL SANKAV
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