| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2701 |
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| Symbol | |
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| ID | 4174461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3290570 |
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| End bp | 3293038 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055719 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_662267 |
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| Protein GI | 109899012 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTAA TAATAAAAAA GCTCCCGCTG GCGATTGCAT CGATTTTGAT GACGCAACCA
TTGATTACCC TAGCTCAAGA AGCACCGGCT GTGCCCGTAA ACGACGATGC ACTGGAAATC
ATTGAAGTCA CCTCACGTAA AAAAGTCGAG TCATTAAACC GTATTCCTGT GGCCGTTTCT
GCTTTTTCTG ACACTATGAT CGAGCAACAA GGCTTTCAAA GCATCGATGA TATTGCACGC
TTTTCATCTG GGTTGAGCTT CTCTAAAGCC TTTGGTCGTG CCACGGAACG CCCGGTTATT
CGCGGTATGG GCAACGTACT CGCTGGTATA CAGTTCGGGG TTGAGTCAGG CGCAGCTTAC
TTTATTGACG GCAACTACTA TTCTGGTGAT GTGCAGAGCT TAGATATGTC AGACGTTGCC
CGAGTAGAAG TGGTGAAAGG CCCGCAAAGT GCTTTGTACG GGCGAAATTC TTATTCAGGG
GCAATCAATT TCATCACCAA AGGCCCTGAT CACGGTGACT TTACCGGCAA CGTAAAATTG
AACTTGGCGC AAGATGCACA GCGCACAGCT TCTGCGTATA TCAGCGGCCC GTTAAATGAT
TGGTTAGCGG CCAGCTTAAG TCTGCGAGAT TACCAAGTTG ACGGTGATGA TAATTGGCGC
AATATCGTCA CCGATGACAT AGTGGGTGGC GAAGACACGC GTTCAGTTAG CGTTGTTTTA
GATGCGGCCC CCTCTGACAA ACTCGGTGTG CGCTTTCGAT TTCAAAGCCA AGAAGACAGA
GATGAAACAC GGCCGTTTTT CCTAACCCCC ACCAGCGAAA ACAACTGCGC ACCTGGCTAC
CGCTCTTTGG CCTCTTGGGC TGCCTCTGGC TCTGACAATA ACTTTCAATA CTTCTGTGGC
GAGATTAAAA ACCAGCCCAT TGCCCTTAAC GATAAAGCGG ATACCGACGG TATACCAAAC
GAGGTGCCGG GTGTTCCGGT TAGTAGCTTT CTACCTTCTG GCTCAACGTT TTTCGGCACG
CCTTACGATA CTGCAGATGG AACCGCCTTT GATGGCGTCG GTCGAGATCT GATTATTTCG
AGTTTGGCAA TGGAGTATGA AACCGATGCA GGCTATAGCA TGTCGTTAGC ACTGGGTTAT
CGTGATGACG ACGTCAGTAC GGGCTCTGAT GGCGATAATT CATCGGTAAA TTATACCTTT
GCACCGGGAC AAGAGGCCTT CTTTGCCAAT ACGTCACGCC AAGAAACCAA AGATAAAACG
CTCGAGTTCA CCTTTCAATC ACCTGAAGGA AAACTCCAGT GGATGGCGGG TGCTTTTTAC
TATGAGCAAG ACCGAGATAG TTTTGATCTG ACCTTTGAAG ACACCAAAGT CGGTATTTTC
CAAGACAACA GTACGGTCAC CAACAAGGCC GTTTATGCCT CTGTTGATTA CCAATTTAAC
AATAAGCTTG ACGGTACGCT TGAAGCTCGC TGGGCCGAAG AAGAAAAAAC GGTGACCGAG
TTTGCCCCAG ATGGCCTAAT GACGTTTGAT GCAGATGGCA ATTGGAACAA CTTTACCCCC
AGAGCCACCC TCAATTACCG TTATGACAGC GACACCATAT TTTACGGCAT CGTCGCCCAA
GGCGTTAAAC CTGGCGGCAT TAATGGCTCA GCTGGCGCCG ACACGGGCAA ACCCACCTAC
GAGCAGGAAG AAATCACCAC TTACGAGCTC GGTATAAAAA GCAGCGCCTT GAACAAGATA
TATGCCACGG TTTCTATGTT TTACAACGAT GTAAGCGACG TTCAATTGAC GACACCGCTG
AATGTACCAT CAGGCAATAT CACCTCTGTC GCCACAAACC AAGGCGAAGG TAAAGTATTT
GGTATAGAGC TGGATATTAA CGCCCAGTTT ACCGATAACT TATCAGGGCG GTTTACCTAT
GCATTAGCGG ACACCAAATT TACCAAAGGT TGTGACGACT TTCAGTGGTC ATTAACCAGC
GGCGGCGGAG TGTTAACACC TGGCACGACT ACGGGTACCG ATTTTAGAGA CGATTTTGGT
ATTACCACGT CCGCTAGTTG CTCTATCGAT GGCAACGCGT TCCCTCTCAG TTCGAAGCAT
CAAGCCAGTG CCTTTTTAGA ATACATCACG CCCATCACCG GCGAACTCGA AGCCTTCTTT
AATATCGATG CCAGCTATGA GTCTAAAAAG TATGTGCAAG TGCATAACTT AGCCTATGTG
CCCAGCGCTA TCATTATGGG CGCCCGAATG GGTGTAAACG GCGAAAACTG GCGGGTGAGT
TTGTATGCTA GAAACCTGAC AGATGAAGAT GCTCCCATTC TGACATCTCG CTGGTTAGGC
ATTCCTTACT TTACCTTTTC ATCCCTTAAC ACTGCGCCTG ACGGGGCTGA TAATGGCTCA
CCGCGAGCAT TTTTTAGTGC CGCTCGACGA GGTCGACAAA TGGGAATAGA CATGACATAT
CGCTTCTAA
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| Protein sequence | MTLIIKKLPL AIASILMTQP LITLAQEAPA VPVNDDALEI IEVTSRKKVE SLNRIPVAVS
AFSDTMIEQQ GFQSIDDIAR FSSGLSFSKA FGRATERPVI RGMGNVLAGI QFGVESGAAY
FIDGNYYSGD VQSLDMSDVA RVEVVKGPQS ALYGRNSYSG AINFITKGPD HGDFTGNVKL
NLAQDAQRTA SAYISGPLND WLAASLSLRD YQVDGDDNWR NIVTDDIVGG EDTRSVSVVL
DAAPSDKLGV RFRFQSQEDR DETRPFFLTP TSENNCAPGY RSLASWAASG SDNNFQYFCG
EIKNQPIALN DKADTDGIPN EVPGVPVSSF LPSGSTFFGT PYDTADGTAF DGVGRDLIIS
SLAMEYETDA GYSMSLALGY RDDDVSTGSD GDNSSVNYTF APGQEAFFAN TSRQETKDKT
LEFTFQSPEG KLQWMAGAFY YEQDRDSFDL TFEDTKVGIF QDNSTVTNKA VYASVDYQFN
NKLDGTLEAR WAEEEKTVTE FAPDGLMTFD ADGNWNNFTP RATLNYRYDS DTIFYGIVAQ
GVKPGGINGS AGADTGKPTY EQEEITTYEL GIKSSALNKI YATVSMFYND VSDVQLTTPL
NVPSGNITSV ATNQGEGKVF GIELDINAQF TDNLSGRFTY ALADTKFTKG CDDFQWSLTS
GGGVLTPGTT TGTDFRDDFG ITTSASCSID GNAFPLSSKH QASAFLEYIT PITGELEAFF
NIDASYESKK YVQVHNLAYV PSAIIMGARM GVNGENWRVS LYARNLTDED APILTSRWLG
IPYFTFSSLN TAPDGADNGS PRAFFSAARR GRQMGIDMTY RF
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