| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2666 |
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| Symbol | |
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| ID | 4174426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3250931 |
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| End bp | 3251923 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638055685 |
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| Product | D-cysteine desulfhydrase |
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| Protein accession | YP_662233 |
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| Protein GI | 109898978 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
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| TIGRFAM ID | [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAACT TTGCACTTAT TCCACGGGTA ACAATCTCCC ACAATCCAAC ACCCCTTGAG
AGTTTACCCA GGTTATCTGA AAAAGTGGGA TGCAAGGTGT ATATCAAACG CGATGATTGC
ACCGGACTTG CTGGTGGCGG CAATAAAACC CGCAAACTAG AGTATTTAAT CGCCGATGCT
CAGCAACACG GGGCCGACAC TCTGGTGACG GTGGGAGGCT TGCAATCAAA TCATGCGCGG
CAAACTGCTG CCGCGGCCGC TAAATTTGGC TTAGGTTGCG AGCTTGTGCT CGAAGATGTT
AAGGGCACGC CTAAAGCGGA TTATTATCAA AACGGAAATG TGTTATTGGA CACTCTACTG
GGCGCCAATA TCCATCGTTT AGGCCTAGAA CAAGAGGTTG AAGCGTATAC CAGTGCGCTG
CTTGCAAAGC TAAAAATTCA GGGGCGAAAG CCGTATTTTA TTCCCATGGG CGGGTCGAAT
GTGATGGGCA GTTTAGGCTA TGTGCGCTGC GCCAAAGAAA TATTACAACA ATTGGCAGAT
GATGATCTTC ACATCGACCA AATTGTGCTC GCGACGGGCA GTGCAGGTAC CCAAGCAGGC
TTGCTTGCAG GGCTGATTGC TGCTAACTCA GACATCTCGG TACTGGGGGT AGCGGTGAGT
CGCTCGAAGG AAGCGCAAGA ACAGTTAGTG GAACAGTTAC TCAGAGAAAC GCTCACTTTT
TTAGACATTG ATCCCAATCG GGCGAAAGGC AAAGTGGTTG CCAATGGCAA CTATTTTGGC
GAAGGTTACG GTATGACTAC GCCATCAATG GTAACGGCCG TCAAGCGCTG CGCCGAACTA
GAAGGCGTGT TATTAGATCC CGTCTATACG GGCAAGGCAA TGGCTGGCTT TATGGACTTG
TGCGCCACAG GTGAGATTGG GGCAAATAGT CACCAGCTAT TTATTCATAC TGGGGGCAGT
CAGGGGCTGT TTGCTTACCG TGAGGAATTT TAA
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| Protein sequence | MINFALIPRV TISHNPTPLE SLPRLSEKVG CKVYIKRDDC TGLAGGGNKT RKLEYLIADA
QQHGADTLVT VGGLQSNHAR QTAAAAAKFG LGCELVLEDV KGTPKADYYQ NGNVLLDTLL
GANIHRLGLE QEVEAYTSAL LAKLKIQGRK PYFIPMGGSN VMGSLGYVRC AKEILQQLAD
DDLHIDQIVL ATGSAGTQAG LLAGLIAANS DISVLGVAVS RSKEAQEQLV EQLLRETLTF
LDIDPNRAKG KVVANGNYFG EGYGMTTPSM VTAVKRCAEL EGVLLDPVYT GKAMAGFMDL
CATGEIGANS HQLFIHTGGS QGLFAYREEF
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