| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2619 |
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| Symbol | |
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| ID | 4174379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3182773 |
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| End bp | 3183378 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638055640 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_662188 |
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| Protein GI | 109898933 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACAG TAATTTTAAT TGGTGCATTG GGCAAAATGG GGCAAGCAGC ATTAACCGGG
CTTGGTAAGC ACAACGTTAT CACTGCTGGG CGCTCTGGCG ACGTTGATCA CATAGTGGAT
ATCACTAACG AAGCGTCCAT TCGTGAGCTG TATGAAAAAG TAGGTCATTT TGATGCAGTT
GTGAACACAG TTGGTGTGTG TGAGTACGCA ACCTTCGGTG AGATGACAGA AGCACAGTGG
ATGACCACAG TGATGAGCAA AATGATGGGC CAAATCAACC TAGTTCGCAT TGGGCAAGAA
TACATCGCTG ACAGCGGCTC GTTCACCCTA ATCAGCGGCA TTTTGAATAA AAAGCCCATT
CCCTTTGCGA TTGCCGATGC CACCACCAGC GGCGCCATTG ACACCTTTGC TAAAATCGTA
TCACTGGAAA TGCCACGAAA CATCCGTATC AACGTGGTCA ACCCAACGGT ACTCACAGAA
GCATGGGATG TTTACGGTGA AATGATGCCA GGCTTTCAGC CCGTACCAAG CGAATTGGTA
GGCAAAGCGT TCGAACGCTC AGTAGACGGC TTCATCACAG GCGAAGTCAT CGTCGTAGAC
GCATAG
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| Protein sequence | MKTVILIGAL GKMGQAALTG LGKHNVITAG RSGDVDHIVD ITNEASIREL YEKVGHFDAV
VNTVGVCEYA TFGEMTEAQW MTTVMSKMMG QINLVRIGQE YIADSGSFTL ISGILNKKPI
PFAIADATTS GAIDTFAKIV SLEMPRNIRI NVVNPTVLTE AWDVYGEMMP GFQPVPSELV
GKAFERSVDG FITGEVIVVD A
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