| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2607 |
|---|
| Symbol | |
|---|
| ID | 4174367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3169916 |
|---|
| End bp | 3171370 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638055628 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_662176 |
|---|
| Protein GI | 109898921 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3211] Predicted phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGACC AAGATTTAGG ACCAGTAAGC GAAGAGAAAA TCGAACCGGC ATTTAGCCGT
AGGCAAGTAT TAAAAGGCGG CTCAGTGGCT GCGGCCAGTA CGGCATTTAT GGCGTTATCC
AGTAAATCAC AAGCGGCATC TTTGCCGTTT AGCAGCGCTT ACGGCCCGTT GTTTCCTACT
GCTGATAAAG CGACAGGCCT AATGTTGTTA TCACTGCCAG AAGGGTTTGA ATACACCTCA
TACGGATGGA CAGGTCAAGT TCAAGCCGAT CGATTACCCA CACCAACGGA TCATGACGGA
ATGGGCGTAG CTGCTGTAAA AGGTAACGTT ATCGCACTGG TACGGAACCA CGAATGCTCC
GAAGGAGAAG GCTTTCCATC ATCTCCCAGA GGGAATCGCG GTGTCTATAA TGAAGCACAA
AATGGCGGTA CCTCAACCAT CATGTTTGAT GTACTAAAGG GCGAGTTTTT ATCTTCTTAT
AACAGCCTAG GTGGAACGAT ACGCAATTGT GCTGGTGGTG TTACACCTTG GGGCACGTGG
ATGTCATGCG AAGAGACTTT TCACGCCTGG AACGCAGGTC CTCAGGGCGT TAACCATGGT
TACGTTTTTG AAGTACCAGG GTTTGGTATC TCAGATGGAC AACCTATTCG TGAAATGGGG
CGTTTTTCTC ATGAGGCAGC AGCGGTTGAC CCAGCCACAG GTTTTGTTTA TGAAACGGAA
GATGCAGGTT CGTCTGCTTT TTATAAGTTT GAACCAGCGG GTCAGTGGGG AGATTTAAAA
TCAGGCGGTA AACTGTATGC GATGGTTGTA AACGATCAAC CACGGGTTGA CTTACGCGGT
GGTTTAGTCG AAGGCACGGT GTGGGACGTG ACGTGGCAAG AAGTGCCAGA TCCAGATGCC
ATGAGTGAAC GTTGTTTCGA CCAAGCATTT AACGCTGCCA TCATAGAGCG CGGAGAAGGT
TGCTGGTACG ACGACGGTAA AATTTATTTC GTTTCTACCT CCGGTGGCGC AGCTAATCTT
GGTCAGGTGT TCTGCTATGA CCCGCGCAAG GAGACAGTCA CCATATTGTT TGAATCTCAA
GACGCGCTCA CCCAAGTTGA TGGTCCAGAT AACATCGCTA TCAGCCCACG TGGCAACATG
CTGTTATGTG AAGACGGCGG CTCTAATCCT AAGCGCCTTG TGGGGTTAAC TAAATCGGGC
GACATCTTTC CATTTGCTGA GAATAACATT GCGTTAGACG AAGGTGACTT AGCCTCTATC
GACAGCATTT ATCCTGGCAC TCAAGCTAAT TTTTGGGACT CGGTGGGGGA GTCAGTTGAC
GGGAGCGCTC GTCGCAGCTT CACCAGCCGC GAATGGGCAG GGGCGTGTTT CCATGGCCGC
TGGTTGTTTG CCAATGTGCA GTCGCCAGGC GTCACGTTTG CTATTACGGG CCCTTGGGAA
AACGGCGCAC TTTAG
|
|---|
| Protein sequence | MLDQDLGPVS EEKIEPAFSR RQVLKGGSVA AASTAFMALS SKSQAASLPF SSAYGPLFPT
ADKATGLMLL SLPEGFEYTS YGWTGQVQAD RLPTPTDHDG MGVAAVKGNV IALVRNHECS
EGEGFPSSPR GNRGVYNEAQ NGGTSTIMFD VLKGEFLSSY NSLGGTIRNC AGGVTPWGTW
MSCEETFHAW NAGPQGVNHG YVFEVPGFGI SDGQPIREMG RFSHEAAAVD PATGFVYETE
DAGSSAFYKF EPAGQWGDLK SGGKLYAMVV NDQPRVDLRG GLVEGTVWDV TWQEVPDPDA
MSERCFDQAF NAAIIERGEG CWYDDGKIYF VSTSGGAANL GQVFCYDPRK ETVTILFESQ
DALTQVDGPD NIAISPRGNM LLCEDGGSNP KRLVGLTKSG DIFPFAENNI ALDEGDLASI
DSIYPGTQAN FWDSVGESVD GSARRSFTSR EWAGACFHGR WLFANVQSPG VTFAITGPWE
NGAL
|
|---|
| |