Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2584 |
Symbol | |
ID | 4174344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3132500 |
End bp | 3134833 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638055605 |
Product | hypothetical protein |
Protein accession | YP_662153 |
Protein GI | 109898898 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0639598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCT TTTCTCGCTC TTCTTTATTT GCCAGTCTCG GGATCCTATT GACAGGCCTT ACCGTGTCAT TTTCAAGCTA TGCCACTGTC AGTATCATAA AAGGCAAAAC CGTTATTCCC CATGGCAACG CGACCTCAGA CAGCGATATC ACCATTAAAA ACGATAAACT CGCATTTTCA TTAGCCATGG GATCAGCACC GCCTTGGGGC GTAGCGCGAG GTTGTATTGT TGATATTGCA AACGTTGAAG CCGATGGGGC ACTGAGCCTT GACCGCGTGG CGTTTGCGGA TTTCATACCG AATGATTGGT CAAGCTGGCC CAACACATAT CAAACCCTTG ATGTGATAAA AGACAGCTCT GATGAAGCCA TCGTTAACAT TACCCGAGAT TTTGGGCAGG TTGAAATAAG CACTACCTAT AGTTTGCTTT CAGGCTCTGA CATTATTCAT GTACAAACCA CTATGACCAA TCAAGGTGAA GCGATCCCAG ACATGCGTTC AGGGTTTACC TTATGGCCCG ATGGGGGATA CAAGTTTGCG GTACCAGAAC ATAAATCAAG CGATAAAAAG GAGCAGGCTG CGAATTTTAT TGCTGATCGC TTTGTGGGCT ATGCTGCCGA TTGGGCGGTT GCCTTACACG CTCCTTACCT GAGCGAAACC AAACACCAAT CAAGAGATTT ATATACCCAG CATAGTTTGC AAAAAGGCCA AACTGTGACG TTCACAGGTG ATTACCAAGT CTTGGCCAGC GGCGATTTAG CCCCAGTGGT ACGGGCTGAA ATTACCCGTA AAAACGCGAA AGCGGGCACG CTTTCAGGAG AAGTACGCAC TCAAAGCGGA AACTTGCTCA CACAACCTGC CATTGTCGTG ACCAAAGACG ATGTACCCTA TATGTGGGGG TTAGGCCAAA ATGGCCAGTA TCAATTTGAT TTACCCGTTG GGCAATACCA AGTCTATGCC ACAGGCAAAG GCTATTCTGC GAGCAAAATT CATGACATTG AAATAACTGA AAAGCAAACC CAAACATTGT CGTTTAATGA TCTTCTCGCC CCCGGTAAGG TCAGTGTTCA GGTAACCGAT GCCAACACCA ACGCGCCCCT TGATGCGAAA ATTAAAATTG AAAAAGGCAA TCAGCCATTG ATTGAGTTTT TAGGTGCGCG CACGTTTTTC ACTGAACTTG ATAGTAAAGG CCAAGCGACA TTTCCACTGG CCCCCGGTGA ATACCAACTG AATATCTCTG CTGGTGGTGG TTTCAACGCA AAGCCTGAAT TAATGAACAC CAACGTCAAA GCTAATGAGA CTACAAATAT TACCAGTGCT ATTACCATCA GTACGTACTC GACACAGCAT GGTTGGTACG CAGGGGACTT ACATCACCAT GCTAACGTGC TCGAAGGCTC TACTTCCCCT GAGTATTTGG TGCGCTCGCA ATTAGCTGCG GGATTAAATG TGTTGTTTGT GAGCGATCAT GATTCGACCA AAAACAATGC TGAAATACAA GCGCTGGCAG ATAAACGCGG TGTGCCTTTT GTTCCGTCAA TTGAGGTGTC ACCGTCGTGG GGGCATTTTA ATGCATTCCC AATTGATAGC GGGGCACAGT TATCGGTCGA CCCAGGGGTG GATGATATTC ACACCCTGAT CAAAGATATG CGCCGCATGG GCGCCACGGT AATCGCATCA AACCACCCGT ATATTCCCTA TGGTTACCTA AGCAGCTTGA ATAAAAACAC TGCTCCAGGT GGTTTCAACC CTAGTCTTGA TTTGTTCGAA TTAAACGCTG GAGTCGATAA CGCGCCAACA ATTGAGAAAG CCCATCAGCT TTGGTCACAG GGGTTGCCTT ACTACTATAC CGCAGGATCA GACACTCACG ATGTATGGAA TCAAACCAGC GGCTTAAATC GCATGTTCGT TTACACGGCC AGTAAACCCG ATGCACATGC GTTCGCTCAA GCCATGAAAA ATGGACGTTC TTATGTGTCA TTCGGCCCGA TCATTTACCC GCAAAATGTG ATGTTTGGTG ACACGGTTAA ACTGGCAAAA GACCAACCTC AATTGCTTAC AGTGGATCTG GTTGCAGTCA ACGGCCTTAA GTCTATACAG TTGATTGGTG GCGTGAGCGA GTCTAGTCGT TCTGCCCAAA TTCAAAATGA AAACTCAGGC GAACACAGCA GCAGAGTAAT CAAGCATCAG GCACTCAGTG GTGATAGTGC GTCGATTACC TTTAACCTGC CTAAGGTATC GGGCTGGGCC GCCTTAGTGG TCGAAGATAT GCAAGGGCAC AAAGCTTATT CGAACCCGAT TTGGTTAAAA GAGGTAGATA AAAGCCAGTT TTAA
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Protein sequence | MKLFSRSSLF ASLGILLTGL TVSFSSYATV SIIKGKTVIP HGNATSDSDI TIKNDKLAFS LAMGSAPPWG VARGCIVDIA NVEADGALSL DRVAFADFIP NDWSSWPNTY QTLDVIKDSS DEAIVNITRD FGQVEISTTY SLLSGSDIIH VQTTMTNQGE AIPDMRSGFT LWPDGGYKFA VPEHKSSDKK EQAANFIADR FVGYAADWAV ALHAPYLSET KHQSRDLYTQ HSLQKGQTVT FTGDYQVLAS GDLAPVVRAE ITRKNAKAGT LSGEVRTQSG NLLTQPAIVV TKDDVPYMWG LGQNGQYQFD LPVGQYQVYA TGKGYSASKI HDIEITEKQT QTLSFNDLLA PGKVSVQVTD ANTNAPLDAK IKIEKGNQPL IEFLGARTFF TELDSKGQAT FPLAPGEYQL NISAGGGFNA KPELMNTNVK ANETTNITSA ITISTYSTQH GWYAGDLHHH ANVLEGSTSP EYLVRSQLAA GLNVLFVSDH DSTKNNAEIQ ALADKRGVPF VPSIEVSPSW GHFNAFPIDS GAQLSVDPGV DDIHTLIKDM RRMGATVIAS NHPYIPYGYL SSLNKNTAPG GFNPSLDLFE LNAGVDNAPT IEKAHQLWSQ GLPYYYTAGS DTHDVWNQTS GLNRMFVYTA SKPDAHAFAQ AMKNGRSYVS FGPIIYPQNV MFGDTVKLAK DQPQLLTVDL VAVNGLKSIQ LIGGVSESSR SAQIQNENSG EHSSRVIKHQ ALSGDSASIT FNLPKVSGWA ALVVEDMQGH KAYSNPIWLK EVDKSQF
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