Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2438 |
Symbol | |
ID | 4174187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2964439 |
End bp | 2965815 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638055449 |
Product | DEAD/DEAH box helicase-like |
Protein accession | YP_662008 |
Protein GI | 109898753 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTTG AGGCATTAGG CTTGCGTGAT GAGCTCATTC ACGCCATTGC TACACAAGGT TACTCGGTCG CCACAGACAT TCAACGTGAA GCAATACCCC TTGTGTTAGC TCAACATGAC CTGTTAGCCG TAGCCCAAAC CGGTACAGGG AAAACGGCGG CGTTTACCTT GCCCTTATTG CAACGTTTAG CCGCGAAACA AAGCACCAAG GTACAGGGTG TGCGAAGCTT GATTGTTACC CCAACTCGGG AATTAGCAGC GCAAGTAGCC ATCAGTGTTG AAATTTACAG TACTCAGTTG AATATTCGCA GCTTTGCGGT TTACGGCGGC GTTAGAATCG AGCCGCAAAT AGCGCAATTG CAAGAGGGCG TAGACGTGCT GATTGCCACA CCTGGCCGTT TACTTGATTT GTATGAACAG CGGGCTTTGC ACTTTGAAAA CCTAGAGATA CTCGTGTTTG ATGAGGCCGA TCGTATGCTG GATTTAGGCT TTATTGATGA CGTAAAGCGC ATTCAATCGC TGTTGCCTGT TAAGCGTCAA ACGCTGTTGT TTTCAGCTAC TTTTTCAAAA CAGATTAAAC ACTTTGCGAG GGAAATGCTG AATGCTCCAA AGACGATTGA AGTCAGCGCC GTGAATAGTA CAGTGGATTT AGTCGCGCAA ACATTCCACC CGATAGAGCA GGCGCGAAAA AGCGCCGCGC TTATCCAACT TATTCAACAG CACAGATGGT CGCAAACACT AGTGTTTATC CGCACTAAGC GAACGGCTGA CGCACTAGTG ACTGAACTTG AAGATGCTGG TATTGCTGCT GCATCTATTC ATGCCAACCG AACACAACAT GCACGTACCC AAGCCTTAAA TGCCTTTAAG GCCGGTGAAA TACAGGTTTT GGTTGCCACC GATATCGCAG CTAGGGGCAT TGATGTTAGC CAGTTACCCT GCGTTGTTAA TTATGACCTG CCGTACGTAC CTGAGGATTA CGTGCATCGT ATTGGGCGAA CAGGACGAGC AGGAAATACA GGGACGGCGA TTTCTCTTTT CAGCCCAGAT GAGATCTCGC AGCTTCAATC CCTTGAGCGC TATTTAGATC AGCATCTAAA GCCTTCTACT TTGGTTGGTT TTGCGCCAAA AGACCAAGTG ACAAAGTCAT GGTCAGCCAA CAAAGCCAAC ACACGCGTTA ACAGCGCTGA AAAACCCACC TCAAGGAATA TGGAAAATAC GAAACATGTG AAGGGCAAAC CCCCTGCAGC CAAGTTAAAC ATTGATGATG AAGATGATGA ACTGTATGGG AATTTCGAAG CTGACCCGCA TACTTCGAGT TCACGAAAAC AGCACAAAGG TAGTGCAGGG GGAGCCAAAC GAAGTCGCAG AAAATAG
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Protein sequence | MSFEALGLRD ELIHAIATQG YSVATDIQRE AIPLVLAQHD LLAVAQTGTG KTAAFTLPLL QRLAAKQSTK VQGVRSLIVT PTRELAAQVA ISVEIYSTQL NIRSFAVYGG VRIEPQIAQL QEGVDVLIAT PGRLLDLYEQ RALHFENLEI LVFDEADRML DLGFIDDVKR IQSLLPVKRQ TLLFSATFSK QIKHFAREML NAPKTIEVSA VNSTVDLVAQ TFHPIEQARK SAALIQLIQQ HRWSQTLVFI RTKRTADALV TELEDAGIAA ASIHANRTQH ARTQALNAFK AGEIQVLVAT DIAARGIDVS QLPCVVNYDL PYVPEDYVHR IGRTGRAGNT GTAISLFSPD EISQLQSLER YLDQHLKPST LVGFAPKDQV TKSWSANKAN TRVNSAEKPT SRNMENTKHV KGKPPAAKLN IDDEDDELYG NFEADPHTSS SRKQHKGSAG GAKRSRRK
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