| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2415 |
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| Symbol | |
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| ID | 4174164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2937424 |
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| End bp | 2938278 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055426 |
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| Product | nitrate ABC transporter, ATPase subunits C and D |
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| Protein accession | YP_661985 |
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| Protein GI | 109898730 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.247099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCATA AACATCATTT AGAACTAACA CAAGTAGGCA TTGATTTTCC TACCCCAAAA
GGGCCGTTTA CGGCGTTAAC TGATGTGAAC TTGCGTATCA ATAAAGGTGA GTTTATATCC
CTAATTGGTC ATTCAGGGTG CGGTAAATCG ACAGTACTCA ACATCATTGC TGGCTTGCAC
AAGGCCACCA AAGGCGGGGT AATCTTAGAC AGTCACGAGG TAAACGAGCC GGGACCTGAG
CGTGCTGTTG TGTTTCAAAA CCATTCCTTG TTGCCTTGGC TGACGGCGTA TAAAAATGTC
GAACTAGCGG TCAAGCAAAC CAGTAAAGGC CGCAGTAAAG CAGAAATGCG CGACTGGGTT
GAGCACAATT TAGAGCTGGT ACACATGAGT CATGCGGTAG ACAAACTGCC TGCTGAAATA
TCCGGTGGTA TGAAGCAACG CGTCGGTATT GCCAGAGCGC TAGCCATGGA GCCTAAAGTG
TTATTAATGG ATGAGCCATT CGGTGCGCTA GACGCGTTGA CTCGGGCGCA TTTGCAAGAC
TCCATCATGG AAATTCACGC TGACCTAGGT AACACAGTGG TGATGATCAC CCATGATGTT
GACGAAGCGG TGCTTTTGTC AGACCGCATC GTAATGATGA CTAACGGGCC GTCAGCCACC
ATAGGCGAAA TTTTGGATAT TGAGCTTGCT CGTCCTAGAG ACCGTTTGGC ACTGGCAGAC
AACCCTCAGT ACAACCACTA TCGTCACGAA GTACTGACCT TCTTATATGA GAAGCAGCGC
AAGGTCGAAT CGGTAGCTGC CCACCGCAAA AAATCACAGG TCAATAACAA GGATAAAAGC
GCGAATGTCG CCTAA
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| Protein sequence | MTHKHHLELT QVGIDFPTPK GPFTALTDVN LRINKGEFIS LIGHSGCGKS TVLNIIAGLH
KATKGGVILD SHEVNEPGPE RAVVFQNHSL LPWLTAYKNV ELAVKQTSKG RSKAEMRDWV
EHNLELVHMS HAVDKLPAEI SGGMKQRVGI ARALAMEPKV LLMDEPFGAL DALTRAHLQD
SIMEIHADLG NTVVMITHDV DEAVLLSDRI VMMTNGPSAT IGEILDIELA RPRDRLALAD
NPQYNHYRHE VLTFLYEKQR KVESVAAHRK KSQVNNKDKS ANVA
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