| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2313 |
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| Symbol | |
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| ID | 4172467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2815323 |
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| End bp | 2816150 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638055322 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_661884 |
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| Protein GI | 109898629 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTTA CTCAAGCACA GCAAGGCGTG CTGGTGATAT CAAACGACAG CTTTTTAATC
GGTTTACTCA CGGGTATCAG CATTGCTAAT AATTTTTCTT TTCGCTCTGT TTCACCGACG
TATCCACTCA ATATTGAAAG CGTCAATCAT GTATGTAAGG TGGTATTGAT TGATTTGCGA
GCGGTATCGG CAGAACTAAT GGCTTCGCAT CTTAAAATAT TGCAGCAAAT TCATACTCAG
TCAGAGATCC CCATTTGTGC TATTTACAGC AAAAGTGATG CAGGATTCAA TCATCACTTG
TCCTGGGTGA ACTATTTTGA TGAAACCGAT TTAAGCGGCC GTCTAGACAG ATACCTCAGT
CAGGTGATTG CTAATGAGAG CCATCAAAGG GAAGAAAGGC GCAATAGTGA ACGGCGAAAT
GCTATTGATA GACGCGGTAT TCCTGCGATA TTTGGTTCCG TACAAAGTAA TCTGCAACCG
ATGATACTCA ATAGCACAAT ACTTGATGAA GAAGAGCAAT ATGTGGTTGG CCCTTTTGTC
ATAAATCACA ACTGCAGAAC GGTATTTTGT CAGGGCAAGG ACGTAATGCT AACCAGCAAA
GAGTTCAAAT TGTTTACCTT GTTAGCGCAA GTGCATGACC ATGTTTGCAG CACCGAAAAA
ATTATTGAGA AACTATGGCC AGATACACGG CGCGCAAACA AGTCGGATTT ATATCAGTAC
ATGCATTTAC TGCGCAAAAA AGTCGAAGTG GACCCGGATA ACCCAAGGTG GATCCTTACG
GTCAAAGGGG TAGGCTACCG GTTAAATACC AACCAATTAC TTCTATAG
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| Protein sequence | MTLTQAQQGV LVISNDSFLI GLLTGISIAN NFSFRSVSPT YPLNIESVNH VCKVVLIDLR
AVSAELMASH LKILQQIHTQ SEIPICAIYS KSDAGFNHHL SWVNYFDETD LSGRLDRYLS
QVIANESHQR EERRNSERRN AIDRRGIPAI FGSVQSNLQP MILNSTILDE EEQYVVGPFV
INHNCRTVFC QGKDVMLTSK EFKLFTLLAQ VHDHVCSTEK IIEKLWPDTR RANKSDLYQY
MHLLRKKVEV DPDNPRWILT VKGVGYRLNT NQLLL
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