| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2281 |
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| Symbol | |
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| ID | 4172435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2773921 |
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| End bp | 2776770 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055290 |
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| Product | FAD linked oxidase-like |
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| Protein accession | YP_661852 |
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| Protein GI | 109898597 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCGT TGCCTGTCAA ATACCTGCGT GAAATTGAAA CCCTATTACC TCCTGAGGCG
ATTATTCAAG ATATTAGCCG GCGCAGAGCA CTCGGAGTAG ACGCAAGTTT TTATCAACTC
ATTCCTCAGC TCGTCCTAAA ACTATCAGAC CTTCGACAGG TACAAACAGT ACTTGCCCTG
AGTCATCAAT TTCAGGTGGC TGTTACATTT CGAGCAGCAG GTACGAGTTT GTCAGGGCAG
GGGATATCTG ATTCAGTGCT CATTACGTTA ACTGACGACT GGCGCCAACA TGAGATCTTC
GATGACGGTC TTCGCATCAA GCTGCAACCT GGCATCATTG GTGCCGATGC TAATCGGATA
CTGGCACGTT ACGGTCGTAA AATTGGGCCC GACCCAGCCT CTATCAATAG CTGTAAAATT
GGGGGGGTCG CAGCCAATAA TGCCTCCGGT ATGTGCTGCG GCGTAGCGCA CAATAGTTAT
TACACTGTAA AGGATATGAC CATAGTTTTA GCGGACGGCA GTGTGGTCGA TACCAGTGAT
GCTAGCAGTG AGATGCAGTT TCGCGAGGCG CACTCATCGT TACTGAACGA GGTTAAAATG
CTGGCCCAAA TGTGCCAAGG GAACGAAAGA TTACGCGAGT TAATTACCCA CAAATACCGC
CTTAAAAATA CCTGTGGTTA TGCCCTTAAT GCATTAATCG ATTATCAGGA GCCGCTGGAC
GTGCTGATGC ATTTGATGAT TGGCTCTGAG GGAACGCTTG GCTTTATCGC CGACATTACT
TACCAAACCG TTGTAGAGCA TGAACACAAA GCCAGTGGTC TGTATTTATT TGCCAGTGCT
CAACATGCCT GTGCTTTAGT AAAGTCGCTT GAAAAGCAAA ACGTAGATGC AGTGGAGCTG
ATGGATCAGC GGGCGCTTAA TTCAGTGAAG GGCCAACCAG GGCTGCCAGA TGCATTTTGT
ACGCCTTATG ATGGTTACAC TGCGCTGCTC ATTGAAACCA GTGCCGACAG CCAAGAAGCG
TTGGCGGAAA ATTGCGCTAA TATCGAGCGT TGTATAGTCC CCTATGCGCC AGTGCAATCT
ATTGCGTTTA GTCGTGATCT TGTACTCAAT CAGCAATTGT GGGCGATTCG AAAAGGTACG
TTTCCCGCAG TAGGTGCGGT GCGTCAAGCG GGCACAACTG TGATTATTGA AGATGTGTGT
TTTCCTATCG AAAATATGGC CGAGGGGATC CAGCGTTTAC ATCAATTATT TGATCAGTAC
GGATACTCAG AGGCAATCAT ATTTGGTCAC GCGCTTGCGG GAAATTTACA TTTTGTATTC
ACCCAAGCAT TTGATGATCA GAGTGAAATA CAGCGCTACG ATGATTTTAT GCAAGCAGTC
GCTCAGCTTG TAGCGGTGGA ATTTAAGGGC TCACTTAAAG CAGAGCATGG CACGGGCAGA
AACATGGCCC CTTTTGTTGA GTTAGAGTGG GGGAACGAAG CCTACAGTGT GATGAAAAGA
CTCAAAGACA TTATTGACCC ACTGGGAATT TTGAATCCGG GGGTGATACT CAATGAGGAC
GCCCAAAGTC ACATCAAAAA CCTTAAACTC CTGCCAAAAG CCGATGAAAT AGTCGATAAA
TGTATCGAGT GTGGTTTTTG CGAGGCTGTG TGCCCATCCC AAGCGTTGAG TTATACCCCA
AGACAGCGCA TTGCGATTTG GCGGCGTATA CAACAATTGC GCGAAGCAGA AATTGTGACC
GACAGCGAAA CCCAAGAGCT GCAACAGTTA GAGACAGACT TCCAGTATAT GGGCATAGAT
ACCTGTGCAG CGACTGGGCT GTGTGCCCAG CGATGCCCCG TGGGAATCAA TACAGGTGAT
TTAATTAGGC AGTTACGCAG TGAAAAACAA ACAAACGTCG GCGAAATAAT CGCTAAGTTC
AGTGCAGAAC ACTTCTCGCT GGTGAGTAAA TCTGCGGGAG TTGGTTTTGC GCTCTCAAGC
AGTGCCACCA AACTGCTAGG AGATCCTTTA ACTAACAAGA TAGGTGCTAA AATGCACCGA
TTATCTACGA AAAATCTGCC TTTGTGGCAA AGTCAGTGGC CCAGTAAAGG GAAAAAAATA
ACCATTGACG GTGCACTTAA AGCCAAGAAA GTCATCTATT TTGCGAGCTG CGCCAGTCGC
AACATGGGGG CCGCTGCTTC AGACAATGAG AAACGCTCTA CATATGATGC CGCCCGTTCT
ATTTTTAGCA AGGCAGGGTA TCAGGTCATG TTGCCTGAAA AGCTTGATGA ATTGTGTTGT
GGTATGCCGT TTAGCAGTAA AGGTTTCCCT GATTTGGCCC AGCAAAAGGG TGAACAATTA
GCTGAGCAAT TAAGGGATAT TAGCAGCGAT GGAAAAATAC CCATTGTGTT TGACACTAGC
CCTTGCAAGC AACAAATCCA AGAACTGAAA GATGTAATAG GGTTGCAAAT TTTCGAGACT
AGCGAGTTTA TGGTGAAGCA CGTTATCGCC GATTTAAAGA TTACCGCGCA AATCGAGCCT
GTCGCGCTGC ATGTTACCTG TAGCAGCCGT AAAATGGGCC TTGCACCGTA TTTACAGGCG
TTGGCAAGAA CCTGCAGTGA AACAGTGATA GAGCCCCAAG GCATTGAATG TTGTGGTTTT
GCGGGGGACA AAGGGATGTT TGTTCCTGAG CTAAATGCCA GCGCGTTGCG CCATTTAAAG
GATCAAATAC CAGCTAGTTG CACTGCAGGC TACAGTAATA GTCGCACGTG CGAGATAGGG
CTAAGTCAGC ACAGCGGAAT TCCTTATCAC TCGCTATTAC TATTACTTGA TGATGTGAGT
CAGCAAAAGA GCCAAGATGC CATTGCATAA
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| Protein sequence | MTPLPVKYLR EIETLLPPEA IIQDISRRRA LGVDASFYQL IPQLVLKLSD LRQVQTVLAL
SHQFQVAVTF RAAGTSLSGQ GISDSVLITL TDDWRQHEIF DDGLRIKLQP GIIGADANRI
LARYGRKIGP DPASINSCKI GGVAANNASG MCCGVAHNSY YTVKDMTIVL ADGSVVDTSD
ASSEMQFREA HSSLLNEVKM LAQMCQGNER LRELITHKYR LKNTCGYALN ALIDYQEPLD
VLMHLMIGSE GTLGFIADIT YQTVVEHEHK ASGLYLFASA QHACALVKSL EKQNVDAVEL
MDQRALNSVK GQPGLPDAFC TPYDGYTALL IETSADSQEA LAENCANIER CIVPYAPVQS
IAFSRDLVLN QQLWAIRKGT FPAVGAVRQA GTTVIIEDVC FPIENMAEGI QRLHQLFDQY
GYSEAIIFGH ALAGNLHFVF TQAFDDQSEI QRYDDFMQAV AQLVAVEFKG SLKAEHGTGR
NMAPFVELEW GNEAYSVMKR LKDIIDPLGI LNPGVILNED AQSHIKNLKL LPKADEIVDK
CIECGFCEAV CPSQALSYTP RQRIAIWRRI QQLREAEIVT DSETQELQQL ETDFQYMGID
TCAATGLCAQ RCPVGINTGD LIRQLRSEKQ TNVGEIIAKF SAEHFSLVSK SAGVGFALSS
SATKLLGDPL TNKIGAKMHR LSTKNLPLWQ SQWPSKGKKI TIDGALKAKK VIYFASCASR
NMGAAASDNE KRSTYDAARS IFSKAGYQVM LPEKLDELCC GMPFSSKGFP DLAQQKGEQL
AEQLRDISSD GKIPIVFDTS PCKQQIQELK DVIGLQIFET SEFMVKHVIA DLKITAQIEP
VALHVTCSSR KMGLAPYLQA LARTCSETVI EPQGIECCGF AGDKGMFVPE LNASALRHLK
DQIPASCTAG YSNSRTCEIG LSQHSGIPYH SLLLLLDDVS QQKSQDAIA
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