Gene Patl_2271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2271 
Symbol 
ID4172425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp2764211 
End bp2764723 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content44% 
IMG OID638055280 
Producthypothetical protein 
Protein accessionYP_661842 
Protein GI109898587 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTTG AATCTTGGAG TGAAATAACG CGCATTGTCA CTACTACCTT GATTATTTAT 
CCCTTTTTGA TCATAGCGAC ACATTTAGTG GGGAAACGCT CATTTGCTAA AATGAACAAC 
TTTGATTGGA TAATCACCGT AGCAGCAGGC TCCATCTTAG GCTCTGCTAT CTTATTGAAA 
GACGTGGTCA TTGCTGAGGT GTTAGTCGCG GTTAGCCTAC TTTTCCTTTT ACAGTATTTA 
CTTACTTGGG CCAGCGCCCA TTTTTCGACT TTCGACAAAG TGGTAAAAAC CTCGCCACAA 
CTCGTGTTTT TCGACGGTGA GTATATAGAG CATGCGATGA AAGATGCACG CCTGACCCGC 
ATTGAAGTAG AGGCAGGTGT TCGAAAAGCC GGTTTCGGTG ATTCAAGCCG AGTCATGGCA 
GTGGTGTTTG AGGCTGACGG CGAGTTAAGT ATCGTTCCGA AAAGTGAAAT TCATGATCAA 
CTTATTATGA AGTTACGCAG TGACGCCAGC TAA
 
Protein sequence
MFFESWSEIT RIVTTTLIIY PFLIIATHLV GKRSFAKMNN FDWIITVAAG SILGSAILLK 
DVVIAEVLVA VSLLFLLQYL LTWASAHFST FDKVVKTSPQ LVFFDGEYIE HAMKDARLTR 
IEVEAGVRKA GFGDSSRVMA VVFEADGELS IVPKSEIHDQ LIMKLRSDAS