Gene Patl_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2232 
Symbol 
ID4172384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2704675 
End bp2705691 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content48% 
IMG OID638055240 
Productaldo/keto reductase 
Protein accessionYP_661804 
Protein GI109898549 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.342948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACCC ATCAGCCAAA CCCTACCTAT TTACCAAGCG AAGACCGCTA CCAAAATATG 
CCTTACAAGC GTTGTGGTAA GAGCGGTATT CAACTACCCC GATTATCCTT AGGTTTATGG
CAAAATTTTG GCGAAGTCGA TACATACAGC AATGCTCAAG CGATGGTGCA CAAAGCATTT
GACTTGGGGA TCAATCATTT TGATTTAGCC AACAATTATG GCCCTCCCTA CGGCTCTGCT
GAATCGACCT TTAGCAAGAT AATAACAAAG AGCTTAGCGC CCTATCGCGA CGAGTTACTG
ATATCCAGTA AAGCCGGTTA CGACATGTGG CCAGGCCCGT TTGGTATTGG TGGCTCACGC
AAGTATTTGC TTGCCAGCTG TGACCAAAGC TTAAAGCGCA CGGGGCTTGA ATACTTTGAC
GTGTTTTATT CCCATCGCTT TGACCCGGAC ACGCCGCTGG AAGAAACGAT GCAAGCATTG
GACACCATAG TCCGCTCGGG GCGTGCTTTG TATGTGGGTA TTTCAAATTA CAGCGCCGAG
CAAACTCTAC AGGCTATCGC TATTCTTAAT GATTTAGGCA CACCATTGTT GGTGCATCAG
CCCCGCTACA ATATGTTTGA CCGTTGGATT GAAGAGGGTT TGACCGATGC GCTTGCAGAC
AACGGCGTTG GCTCAGTGGT GTTTTCCCCA TTAGCCCAGG GCTTCCTAAC CAATAAGTAT
CTTAGGGGTA TCCCTGAAGG TTCACGCGCT GCACGCACTG AGCAAATCCA TCTGAGCGCT
GACCATATCA CTCAAGACAA AATAGCAAAG GTGCAAAAGC TCAACGAAGT AGCCATTGAG
CGCAATCAGA GTTTAGCGCA GCTTGCATTG GCTTGGGTAC TTCACCCCCA GGCTGTGACC
TCTGCAATTA TCGGCGCTAG CCGAGTGGAG CAAATTGAAG ACTGCGTAGC CGCTTTGAAC
AACCTACAAT TTAGCCCAGA ACAACTTGCC AACATTAACC AGATATTGGC GAGTTAA
 
Protein sequence
MITHQPNPTY LPSEDRYQNM PYKRCGKSGI QLPRLSLGLW QNFGEVDTYS NAQAMVHKAF 
DLGINHFDLA NNYGPPYGSA ESTFSKIITK SLAPYRDELL ISSKAGYDMW PGPFGIGGSR
KYLLASCDQS LKRTGLEYFD VFYSHRFDPD TPLEETMQAL DTIVRSGRAL YVGISNYSAE
QTLQAIAILN DLGTPLLVHQ PRYNMFDRWI EEGLTDALAD NGVGSVVFSP LAQGFLTNKY
LRGIPEGSRA ARTEQIHLSA DHITQDKIAK VQKLNEVAIE RNQSLAQLAL AWVLHPQAVT
SAIIGASRVE QIEDCVAALN NLQFSPEQLA NINQILAS