| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2197 |
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| Symbol | |
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| ID | 4172349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2654049 |
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| End bp | 2656544 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055205 |
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| Product | glycogen/starch/alpha-glucan phosphorylases |
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| Protein accession | YP_661769 |
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| Protein GI | 109898514 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.100797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCA AAACCACCAA ACGAGCAACC AAGAAGGTTG CTTCATCAAG CAAAACGATG
ATGAATAAGG CTGAACTCAA GGCATCGATT GTAAAACACT TACACTGCTC TTTAGGTACA
GATGAAAACA AAGCAAACAA TCACGCTTGG TGGAAGGCGA CTTGTGCCTC TGTGCAAGAA
CACGTTTTAG AAGGACTGCG TAAAACCCAA AAATCGCATT ATTTAAATGA TACCCGTGCC
GTACATTACT TTTCGGCAGA GTTCTTAATG GGTCGTTTGA CGTCTAACAA CTTACACAAT
CTGGGGTTGT TCGAACAGAC TGAAAAAGCG CTAAATGAAT TAGGCGTGAA TTTAACCGAT
ATTATGGAAG AAGAGCCCGA TATGGCATTG GGCAATGGTG GTCTAGGTCG CCTGGCTGCT
TGTTTTATCG ATTCACTGGC AACATTAGAC TTACCTGCTG TGGGATACGG CTTACATTAT
GAGCACGGGC TATTTCGTCA AGAGATCCAA AATGGTGAAC AGATTGAACG CCCTGACAGT
TGGCGAGACT ATGGCAATCC GTGGGAGATT TGCCGACCTG AATCGATACA AGATATTCCA
TTATTTGGCT ACGTAGAAAC TAAATACGGT GAGAATGGGC GCATTAGTAA AGAGTGGCAT
CCTGGTCATA TTGTTAAAGG TTTACCTTGG GATATTCCAG TGGTGGGGTA CGGTGGTAAA
ACCGTAAACG TTTTGCGCTT ATGGCAAAGC CAATCCTCAG ACTACTTCAA CTGGGATGTT
TTTAATGCCG GAGGTTACGT GGATGCTCAA ACAGAAAACG TCCAAGCGGA AACCATTTCA
AAAGTACTTT ATCCAAATGA CGAAACCCAA GCGGGCAAAG ATTTACGTCT TATCCAGCAG
TACTTTTTTA GTGCATGCTC CCTAAAAGAC ATTATCCGCA GATATAAACG GGCCCATGGC
GATGACTGGA GCCGTTTCTC TGATCAAGTG GTTATCCAAT TAAACGATAC CCATCCTGCT
GTTGCTATCC CAGAGTTGAT GAGAATATTA ATCGACCGTG CTGAACTTGA TTGGGACTAT
GCATGGAGTA TCTGTAGTAA AACGTTTGCC TACACCAACC ATACCTTGTT GCCTGAAGCA
TTAGAAAAGT GGCCTGCTCG TATGTTTGAA AGGATATTGC CTCGCCATTT GGAAATTATT
TATGAAATTA ACCGTCGCTT CATGGACGAA GTGGAAGCGG TTTGGCCAGG TAATAATGAG
ATCAAGCGTA AACTGTCTAT TATCGAAGAG GGGCCAGACA AAATGGTACG CATGGGGAAT
TTGTCAGTCA TTGGCTCTTT CGCCGTTAAC GGGGTAGCAG AAATCCATTC GGAGCTGGTT
AAGAAAGATT TATTCCCTGA ATTTAATCAT ATGTGGCCAG GTAAACTCAC CAATGTGACA
AACGGCATCA CACCGCGTCG TTGGTTGAAG GCGTGTAATC CTGCATTGTC ACAGTTAATT
GACGGTAAGA TTGGTCAGGA TTGGCCCTTA AATTTAGATA AACTGAAAGG TTTAGCCGAA
TTTGCCGATG ACGCTAAGTT TCAAAAGCAG TTCATGAAAA TCAAGCGTGA TAATAAAGTG
CAACTGGCGA ACGAAGTGTT GGCGTTGACA GGTATTGAGA TTAACCCAGA TGCGATATTT
GATGTACAGA TTAAACGTCT TCACGAGTAT AAGCGTCAAC ATTTAAACCT GTTGTATATC
ATGGCGTTGT ATCGTCGTCT ATTAGAGAAC CCTGACTATG ACATGCATCC TCGCGTTTTC
TTGTTCGGTG CCAAAGCAGC ACCTGGTTAC AAGCTTGCTA AAGACATCAT CTTCGCTATT
AACAAAGTGG CAGAAAAAAT CAACAATGAC GCACGGGTTA ATCACAAATT GAAAGTGGTA
TTTTTGCCTA ACTACCGCGT GAGTTTGGCT GAGAAGATGA TCCCTGCTGC AGATATTTCG
GAACAGATAT CCACCGCAGG TAAAGAAGCT TCTGGTACAG GCAACATGAA ACTGTCCTTA
AATGGTGCTC TCACGGTGGG GACGTTAGAC GGGGCAAACA TTGAAATAGC CGAAGAAGTC
GGAGATGAAA ATATATTCAT CTTTGGCCTG ACAGTAGCCG AAGTAGAAGC GTTAGATAAG
AAGGGCTATA ACCCGTTTGA TTATTATGAT AATAATCGCG AGTTAAAAGC AGTACTTGAT
TGGTTAGACA GCGATTACTT TACACCAGGT AAGCCCGGAG CGCTTTCTTC ATTAAAACGC
AGTATGTTGG AAGGGGGAGA TCACTATAAG GTACTGGCTG ATTTTACGTC CTATTGCGAA
GCACAATCTC TTGCTGATAA TGCGTACAAA GAGCCACAAA GATGGGCCAA AATGGCGATA
CTCAATACGG CGCACATGGG GAAATTCACT TCTGACCGCT CAATCAAAGA CTATGTTGAG
CGCATTTGGA AGCTTAATCC TTGCAAAGTT GAGTAG
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| Protein sequence | MTTKTTKRAT KKVASSSKTM MNKAELKASI VKHLHCSLGT DENKANNHAW WKATCASVQE
HVLEGLRKTQ KSHYLNDTRA VHYFSAEFLM GRLTSNNLHN LGLFEQTEKA LNELGVNLTD
IMEEEPDMAL GNGGLGRLAA CFIDSLATLD LPAVGYGLHY EHGLFRQEIQ NGEQIERPDS
WRDYGNPWEI CRPESIQDIP LFGYVETKYG ENGRISKEWH PGHIVKGLPW DIPVVGYGGK
TVNVLRLWQS QSSDYFNWDV FNAGGYVDAQ TENVQAETIS KVLYPNDETQ AGKDLRLIQQ
YFFSACSLKD IIRRYKRAHG DDWSRFSDQV VIQLNDTHPA VAIPELMRIL IDRAELDWDY
AWSICSKTFA YTNHTLLPEA LEKWPARMFE RILPRHLEII YEINRRFMDE VEAVWPGNNE
IKRKLSIIEE GPDKMVRMGN LSVIGSFAVN GVAEIHSELV KKDLFPEFNH MWPGKLTNVT
NGITPRRWLK ACNPALSQLI DGKIGQDWPL NLDKLKGLAE FADDAKFQKQ FMKIKRDNKV
QLANEVLALT GIEINPDAIF DVQIKRLHEY KRQHLNLLYI MALYRRLLEN PDYDMHPRVF
LFGAKAAPGY KLAKDIIFAI NKVAEKINND ARVNHKLKVV FLPNYRVSLA EKMIPAADIS
EQISTAGKEA SGTGNMKLSL NGALTVGTLD GANIEIAEEV GDENIFIFGL TVAEVEALDK
KGYNPFDYYD NNRELKAVLD WLDSDYFTPG KPGALSSLKR SMLEGGDHYK VLADFTSYCE
AQSLADNAYK EPQRWAKMAI LNTAHMGKFT SDRSIKDYVE RIWKLNPCKV E
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