| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2172 |
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| Symbol | |
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| ID | 4173427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2622570 |
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| End bp | 2624000 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638055180 |
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| Product | exodeoxyribonuclease I |
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| Protein accession | YP_661744 |
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| Protein GI | 109898489 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2925] Exonuclease I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.585102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTACAC CATCGATATA TTGGCACGAT TACGAAACAT GGGGCGTTAA TCCTCAAAAA
GATCCTGCAT GTCAGTTTGC TGGTATTCGA ACCGACTTGG ATCTGAACAT CATTTCCCAG
CCTTTGATGA TTTTCAACCA AATTCCAAAT GATTATTTAC CTAACCCACA GGCATGTTTG
ATCACAGGTA TAACACCACA ACATAGCTTG CGTGACGGCA TGGTAGAGCC CGACTTTATC
CAAAAGATAC ATCAAGAATT TTCGGCGCCT GAAACCTGTG TTGCTGGCTA CAATAATATC
CGTTTTGATG ACGAAGTGAC ACGATACACT CTGTATCGAA ACTTTTACGA CCCCTACGGC
CGCGAATGGC GCAATGGTAA TAGTCGTTGG GATATTATCG ATGTTGTTAG AGCCTGTTAC
GCACTTCGAC CTGAGGGTAT AGAGTGGCCA TTAAAAGACG ATGGTTCTCC TAGTTTTAAA
TTAGAAGATT TAAGCAAAGC GAATAACATT GAGCATGCTG CAGCCCATGA TGCCATGTCG
GATGTACACG CCACGATTGG TATGGCAAAA CTCGTCAAAA CTGCGCAGCC AAAATTATAC
GATTATTTGT TTAATTTACG GTTTAAGAAA AACGTTATTG CCCTTTTCGA TATCAATGCA
CATACTCCTT TGGTACATAT ATCCTCAAAG CTACCAGCCA TAAACGGGTG TTGTACGTGG
ATAGCCCCTG TTGCTCAACA TCCTACTAAT AAAAATGCTT TTATAGTGGT AAATCTAGCG
TTAGACATTC AGCCTTTAAT TGATTTGTCG GTGGACGAGA TTATTGAAAA GCTCTACACC
CCATCCAATA TGCTTGAAGA AGGTGAACAA CGTTTACCAA TCAAATTAAT TCATGTTAAC
AAAAGCCCTG TAATTGCTCC GGCTAAAACG TTAGATGAAT CTAACGCGGC TAGACTCGGT
ATTAACCGAG AAGTGTGCCT AAGCAATCTA AAAGTACTCA AACAACACCC TGAGTTGGTT
GCTAAACTGA TTGCGGTTCA TAGCACGACT AGAGATAACA AAGAACAGGA CGCTGACCAT
GCTCTTTATA GCGGCGCATT CTTTAGTCCA AAAGATCGGG CTTTGATGGA TCAAGTGTTA
CACAGTAGCA CTGAACAATT GGCCGACCTT ACACTCCCCT TTGAAGATCC TAGATTAGAC
AATCTGCTGT TTTATTATAA AGGTCGAAAT TTCCCCACAT CGTTGAATGA GCAAGAACTG
CAACGCTGGC AAAATCACCG TAAGTTCCGC TTGTTGGATG ATACGTCACC GTCCAGTATT
ACGATGACGG ATTACGTACA AACCTTAGAG TTACTCAGCG AACAGTATCA ATCTAATAAC
GACAAATTAG CCATACTTAA AGCGTTATAT ACATACGCTG AACAACTTTA A
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| Protein sequence | MSTPSIYWHD YETWGVNPQK DPACQFAGIR TDLDLNIISQ PLMIFNQIPN DYLPNPQACL
ITGITPQHSL RDGMVEPDFI QKIHQEFSAP ETCVAGYNNI RFDDEVTRYT LYRNFYDPYG
REWRNGNSRW DIIDVVRACY ALRPEGIEWP LKDDGSPSFK LEDLSKANNI EHAAAHDAMS
DVHATIGMAK LVKTAQPKLY DYLFNLRFKK NVIALFDINA HTPLVHISSK LPAINGCCTW
IAPVAQHPTN KNAFIVVNLA LDIQPLIDLS VDEIIEKLYT PSNMLEEGEQ RLPIKLIHVN
KSPVIAPAKT LDESNAARLG INREVCLSNL KVLKQHPELV AKLIAVHSTT RDNKEQDADH
ALYSGAFFSP KDRALMDQVL HSSTEQLADL TLPFEDPRLD NLLFYYKGRN FPTSLNEQEL
QRWQNHRKFR LLDDTSPSSI TMTDYVQTLE LLSEQYQSNN DKLAILKALY TYAEQL
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