| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2169 |
|---|
| Symbol | |
|---|
| ID | 4173424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 2617479 |
|---|
| End bp | 2617781 |
|---|
| Gene Length | 303 bp |
|---|
| Protein Length | 100 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638055177 |
|---|
| Product | type IV pilus assembly PilZ |
|---|
| Protein accession | YP_661741 |
|---|
| Protein GI | 109898486 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGGCT ACAACGACAA ACGTAATTTT TTTCGCATGA TGGTCAATTC AGCTTGCGAG
ATTGTGGTTA ACGACGATGA GTCGAGTCGT ACGTTGCACG CAGTATGTAA GGATATAAGT
GCTACAGGCA TGTCATTTGA AGTGGAAGAG CAATCCGTAG AAATCGGTAC CGCTGTTGAC
GTTTATATTG AATCAACAAA CAGCCAAATC CCTTCCTTGT CAGCCAAAGC ACGCGTGGTG
CGCTCTGAGT GCAATGAAGA CAGCACCTGC GTAATTGGCG TCGAAATTAC TGAGATGAAT
TAG
|
|---|
| Protein sequence | MLGYNDKRNF FRMMVNSACE IVVNDDESSR TLHAVCKDIS ATGMSFEVEE QSVEIGTAVD
VYIESTNSQI PSLSAKARVV RSECNEDSTC VIGVEITEMN
|
|---|
| |