| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2120 |
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| Symbol | |
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| ID | 4173375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2568566 |
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| End bp | 2569804 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055128 |
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| Product | beta-ketoacyl synthase |
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| Protein accession | YP_661692 |
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| Protein GI | 109898437 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000523504 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTAAAC GTCGGGTTGT AGTAACCGGT CTTGGCGTAC TCTCTCCTGT GGGCAATGAT
TATGCTTCCA CGTGGCAGAA TATCGTCGGC GGTAAAAGTG GCATAGGCCC TATCACGGTT
TTTGATGCAT CTGAATACAC CACGCATTTC GCAGGGGAAG TGAAAGACTT CAACGTTGAA
GATTACATCG CCAAGAAAGA AACCAAGAAA ATGGACAAGT TTATCCAGTT TGGTATTGCA
GCTGGAAAGC AAGCCTTAGT GGACTCAGGT TTAGCCATTA CTGAAAAGAA TGCCTCTCGA
GTTGGCGTAG CCATTGGGTC AGGTATTGGC GGTTTAAGTT TGATTGAAGA AAATCATACT
AAATTAGTTA ACTCTGGGCC TAAGCGTATC TCGCCCTTTT TCGTTCCTGC TACTATCACC
AATATGATTT CAGGCTTCCT GTCCATCATG GAAGGTTTAA AAGGCCCTAA TTTAAATATT
GTGACTGCCT GTACCACAGG TGTCCATAAT ATGGGGATAG CTGCACGTAC CATTGCTTAC
GGTGATGCTG ACGCGATGTT AGCTGGCGGT GCGGAAGCGT CTATTTGCCC ATTGGGCTTA
GGTGGCTTTG CGGCTGCTAG AGCGTTATCA ACTCGCAACG ATAACCCGCA AATAGCCAGC
CGTCCGTGGG ACAAAGACCG AGACGGCTTT GTTATGGGCG AGGGTGCCGG TGTTGTTATG
CTAGAAGAGT ATGAGTCAGC GAAAGCTCGC GGCGCAAAAA TCTATGCAGA GCTTGTTGGT
TTCGGCATGA GTGGTGATGC TCATCACATG ACATCACCGC CCGAAAATGG TGAAGGTGCA
GCCGCTGCAA TGCACAATGC ACTCAATGAC GCCTCAGTGA ATGCGCATCA AGTAGGCTAT
ATCAACGCTC ATGGTACATC TACACCAGCG GGTGATGTAG CGGAAGTTGC TGCAGTAAAG
ACTATTTTTC AGGACAGCGC CAAAAAGGTA CTTGTTAGTT CAACAAAATC CATGACCGGC
CATTTATTAG GTGCCGCTGG TGCAGTTGAG GCTATCTTCA CTATCTTAGC GTTGAAAGAC
CAAGTAGCCC CACCGACTAT TAATTTAGAT AATCCAGGTG AAGGGTGCGA TCTTGACTTT
GTTGCACACG AAGCCCGCTC AATCAAAATG GAGTACGGCT TGTGTAATTC ATTTGGTTTT
GGCGGTACTA ACGGTTCGTT GCTATTTAAA AAAGTGTAA
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| Protein sequence | MAKRRVVVTG LGVLSPVGND YASTWQNIVG GKSGIGPITV FDASEYTTHF AGEVKDFNVE
DYIAKKETKK MDKFIQFGIA AGKQALVDSG LAITEKNASR VGVAIGSGIG GLSLIEENHT
KLVNSGPKRI SPFFVPATIT NMISGFLSIM EGLKGPNLNI VTACTTGVHN MGIAARTIAY
GDADAMLAGG AEASICPLGL GGFAAARALS TRNDNPQIAS RPWDKDRDGF VMGEGAGVVM
LEEYESAKAR GAKIYAELVG FGMSGDAHHM TSPPENGEGA AAAMHNALND ASVNAHQVGY
INAHGTSTPA GDVAEVAAVK TIFQDSAKKV LVSSTKSMTG HLLGAAGAVE AIFTILALKD
QVAPPTINLD NPGEGCDLDF VAHEARSIKM EYGLCNSFGF GGTNGSLLFK KV
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