| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2116 |
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| Symbol | |
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| ID | 4173371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2564994 |
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| End bp | 2565896 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055124 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_661688 |
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| Protein GI | 109898433 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0470] ATPase involved in DNA replication |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.113627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTATTCTT GGTTACACGC TTCTTTACAG CAATTGTCCC AGCGCGCGGC GACGTTGTCG
TTGCATCATG CGTTATTGCT AAAAGGTGAA AAAGGCATAG GTAAAACGGA ATTTGCACAA
CAGCTAGGGC GGTTTTTACT GTGTGCGAAT AAACCTGCTC TCTCGAAAGA TAACTTAGGT
CCTTGTGGTC ACTGCCAGTC GTGCTTATTG TCAGCGGCTG GGAATCATCC AGATTTATAC
GAAATTCGTT CTGACAAGCA AATTGGTGTC GATGCTATTC GCGACGCAAT TAAAAAGCTT
TCAGGCTCGG CTCAACTGTC AGGCGCTAAA GTGCTGCTTA TTCATGACGC ACACACTATG
ACAGAGTCTA GTGCCAACGC ATTATTAAAA ACCCTAGAAG AGCCTACAAA CAACACATTC
TTGCTCTTAT TAAGCAGTCA CCCTGAGCGC TTACTACCGA CCATTTTAAG TCGCTGCGAA
AAGGTAGCGT TATTCAGTCC CACTCAACAA GAGTGTATTG ATTGGTTGAA TAAGGAAGGT
TATGCAAATG TTGATGACGC TTTGTTGCGT TTATACGGTA CGTCTCCTTT AGTACTGATT
GAGCACTTAA AAACACCGCC CAAAGTCAAT TATCAAGAAC TAGTTGAAAA TCTAGGTTAT
TTGAATGTGG GTACGGCGGA CCCAGCCGCG CTGGCAACGA AATGGCAAGA CGAAGCCATA
ACAATTGTAA AGTGGTTACA GGTATGGCTT GTAAACCAAC TTAAAACTGG CCAGCCCAAC
ACCGAACACT TATGGCAGAT GCACGCGCGA TGCGTCAACG CTAACGAGCA ATTACGTAAC
CCAGGCGTTA ATAAAACCCT GGTGCTTGTC AACATTTTAC AGTCGATGGC ATTAAAGGCC
TGA
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| Protein sequence | MYSWLHASLQ QLSQRAATLS LHHALLLKGE KGIGKTEFAQ QLGRFLLCAN KPALSKDNLG
PCGHCQSCLL SAAGNHPDLY EIRSDKQIGV DAIRDAIKKL SGSAQLSGAK VLLIHDAHTM
TESSANALLK TLEEPTNNTF LLLLSSHPER LLPTILSRCE KVALFSPTQQ ECIDWLNKEG
YANVDDALLR LYGTSPLVLI EHLKTPPKVN YQELVENLGY LNVGTADPAA LATKWQDEAI
TIVKWLQVWL VNQLKTGQPN TEHLWQMHAR CVNANEQLRN PGVNKTLVLV NILQSMALKA
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