Gene Patl_2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2076 
Symbol 
ID4173755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2520666 
End bp2521145 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content40% 
IMG OID638055084 
Productbacterioferritin 
Protein accessionYP_661648 
Protein GI109898393 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2193] Bacterioferritin (cytochrome b1) 
TIGRFAM ID[TIGR00754] bacterioferritin 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.790215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCGCA GCAAAAAAGT TGTTTCTGCA TTAAACGATG TGTTAACTGG CGAGCTTACG 
TCAATTAACC AGTATTTTCT GCATGCTCGA ATGTATAAAA ACTGGGGCTT AAATGCGCTA
GATAAAAAAT GCTATAAGAA GTCTATTAAG GATATGAAAC AAGCGGATGC AATCATCGAG
CGCGTATTAT TCTTACAAGG CTTACCCAAC TTGCAAATGT TAGGCAAGTT GTTGATCGGT
GAAGACACCG AAGAAATGTT GCAATGCGAT GCAACGTTTC AAAAACATCA GATCCCTGTG
CTCAAAGACG CCATTAGTTT ATGTGAGCAG GAGCAGGACT ATGTGTCGCG CGAACTATTA
GAAGATATTC TAGAGTACGA AGAAGATCAT CTAGATTGGA TTGAGACGCA AGAATATCAA
ATACAACACA TGGGCTTGCA AAACTATCTT CAAGCTCAAG TGATTGAAGG GGAAGACTAA
 
Protein sequence
MLRSKKVVSA LNDVLTGELT SINQYFLHAR MYKNWGLNAL DKKCYKKSIK DMKQADAIIE 
RVLFLQGLPN LQMLGKLLIG EDTEEMLQCD ATFQKHQIPV LKDAISLCEQ EQDYVSRELL
EDILEYEEDH LDWIETQEYQ IQHMGLQNYL QAQVIEGED