| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2070 |
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| Symbol | |
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| ID | 4173749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2516153 |
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| End bp | 2517106 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055078 |
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| Product | cytochrome c oxidase, cbb3-type, subunit III |
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| Protein accession | YP_661642 |
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| Protein GI | 109898387 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.542754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAGCT TTTGGAGCAT TTGGATCACA GTTATTACAC TGGGAACAAT TATTGGATGT
TTTTTGTTAT TGCGGTGGTG TTTAAGCAAC AAAACCGGCG TTGCTGAAGG TGAAGATATG
CATCATGAAT TTGATGGCAT CATCGAAATC AACAATCAGT TACCTCGCTG GTGGACAATT
ATGTTTTACG CCACCATCGT TTGGGGCTTC TTGTACTTCA TACTTTACCC TGGGCTAGGT
AGTTTTGAAG GTGTGCTAGG TTGGAAGAGT TCTAACCAAG ATATACGTTC ACTGGCGGAG
TCTGAACAAG CTCGCATTGA TGCAAAAGAA AATGGCGACA TCGTTCAATA CGACCGCGAA
TTAGATTTTG CCGAAGAGCG TTTCGCACCT ATTTTTGATG CGTATGCAAA GCAACCTATC
GAAACATTAG CGAAAGATCC TGAAGCGTTA AAAGTGGGTC AGCGCTTGTT TAGCCAAAAC
TGTTCACAGT GCCACGGTTC TGATGCTCGC GGTCAGCGCG GATTCCCTAA CCTAACGGAT
CACGATTGGT TATATGGCGG CACGCCTGCC AAAATTATTG AAACCTTGAC CTTGGGCCGC
CAAGCAGCGA TGCCGGCACA GCTAGCGTCT ATGGGTGAAA AAGGCATTGA AGAAGTTGCT
GCGTATGCAT TGAGCCTAAG CGGACGTCAG GTTGACCCAG ACTTAGCTGA GAAAGGTAAA
GTTCGTTTTG CTATCTGTTC AGCGTGTCAT GGTCCTGACG GTAAAGGTAA TCAAGCACTT
GGTGCGCCGA ACTTAACCGA TAATATTTGG TTATATGGCG GCAGCCACAA AGCGGTAACG
GAAACCTTAA CCTATGGTCG TAACGGTGTA ATGCCATCAT TCAAGAAAAC CTTGGGCGAT
GAGAAAATTC ACTTGGTTGC AGCATATGTT TACAGTTTAT CGCAAGATAA ATAG
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| Protein sequence | MSSFWSIWIT VITLGTIIGC FLLLRWCLSN KTGVAEGEDM HHEFDGIIEI NNQLPRWWTI
MFYATIVWGF LYFILYPGLG SFEGVLGWKS SNQDIRSLAE SEQARIDAKE NGDIVQYDRE
LDFAEERFAP IFDAYAKQPI ETLAKDPEAL KVGQRLFSQN CSQCHGSDAR GQRGFPNLTD
HDWLYGGTPA KIIETLTLGR QAAMPAQLAS MGEKGIEEVA AYALSLSGRQ VDPDLAEKGK
VRFAICSACH GPDGKGNQAL GAPNLTDNIW LYGGSHKAVT ETLTYGRNGV MPSFKKTLGD
EKIHLVAAYV YSLSQDK
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