| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2044 |
|---|
| Symbol | |
|---|
| ID | 4173918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 2489583 |
|---|
| End bp | 2490419 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638055052 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_661616 |
|---|
| Protein GI | 109898361 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCAGC ATTTTATTAT TACGCGATTT AACTTACGTA AGGTAGATTG GACGTTGTCG
AAAACCAACG CCCCTGTGTT GACCGACACT TGGATGAGCA ATCGCCTAGC ATTGTTTGAG
AATTATTGCT TCTCTTCCCT TACAGCACAA ACTCAACAAA ATTTTACGTG GCTTGTGTTT
TTTGACGTTA CGACCCCTGA TAAATTTCGG CGTGAAATAG CAAGACTCGA ACAGATATTC
CCCCAGTTTA CGCCCGTTTT TATAGATGGT ATGGATGCGT TTCAGTCGCA AATTCGTGTT
CAGATTAAAC AACGTCTCAG ACAACCTTAT GTCATCACAT CTCGTTTAGA TAACGACGAT
AGCTTGCACC AAGATTATGT CAGAGAAGTC CAAAGTCATT TTGCTCAGCA GTCGTTTATG
GCAATTGATA TTGTAGATGG CTATACCTTG CAAGTTGAAC CGCAAGTGTG TTTTGCAAAA
CGCTCACATG TGCATAACCC TTTCATCAGC TTAATAGAGA AAGCAGGTGA GATAAAAACA
GTGTGGTTTT TAGATCGTCA CGGACAGTGG AGCGATGTTA AAGCGCTTAA GTCTGTTCGA
AACAAACCCA TGTGGATGTC AGTTATTCAT ATGGAAAACA AAGTAAACAC ATTCTTGGGG
TTTGATAATG TGCCATGGAG CTGTATAAAG TCGTTTAACT TAGTATCAGA GGTAGAACAA
AGGCTTGCAG AGAAATGCAT ATCTTATAAT AGTTGGAAAC CAAGAAGTTT GAAAAACAAG
CTAAAAACAA AATGGAAAGT GAACATGAAA TTATTTAAAC GCCAATTGGC CAATTGA
|
|---|
| Protein sequence | MFQHFIITRF NLRKVDWTLS KTNAPVLTDT WMSNRLALFE NYCFSSLTAQ TQQNFTWLVF
FDVTTPDKFR REIARLEQIF PQFTPVFIDG MDAFQSQIRV QIKQRLRQPY VITSRLDNDD
SLHQDYVREV QSHFAQQSFM AIDIVDGYTL QVEPQVCFAK RSHVHNPFIS LIEKAGEIKT
VWFLDRHGQW SDVKALKSVR NKPMWMSVIH MENKVNTFLG FDNVPWSCIK SFNLVSEVEQ
RLAEKCISYN SWKPRSLKNK LKTKWKVNMK LFKRQLAN
|
|---|
| |