| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1968 |
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| Symbol | |
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| ID | 4172103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2388901 |
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| End bp | 2389986 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054976 |
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| Product | hypothetical protein |
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| Protein accession | YP_661540 |
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| Protein GI | 109898285 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0318887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTCAGG CTAAGCAAAA ACAAAGCCTT GCCACCAAGC GCGCTATCGA GCGAGGCTAT
GACAGTAAAA ATGCTGACTG GATGATCGAA TTTGAAACCA GCCCATTAAA GGGTGACTTT
GCATTTGAAG AAGGGGTAAT TCGCCGCGAC CCCACATCGG TCATTTCAGT CGATGATGTT
TATCATTGTT GGTACACCAA AGGCACTGGC GAAACCGTGG GCTTTGGTAG TACTAACCCA
GATGATAAAG TGTTTCCATG GGATTTAACC GAAGTTTGGC ACGCCACCTC AAGGGACGGC
GAAACGTGGC ATGAGCAAGG CCCTGCTATC ACCCGTGGTA CACCTGGTGC GTTTGATGAT
CGTGCCGTAT TTACCCCCGA AGTACTCGCC CATAATGGTA AATACTATTT GGTCTATCAA
ACCGTGCAAT ATCCTTATAC CAATCGACAA ATAGAACAAA TCGCCATTGC CCATGCCGAC
TCCCCTTTTG GCCCTTGGAT AAAATCCACC GCACCGATTT TGAGTCCTTC CATGGACGGC
GAATGGCGCG GTGATGAAGA CAACCGTTTC CACGTGCATT CAAAGGGCAG CTTTGATAGC
CATAAAGTGC ATGACCCATG TTTACTGGTG TTTAATGGCA AGTTCCACCT GTATTACAAA
GGCGAGACCA TGGGCGAAGA AATGAACTTT GGTGGGCGCG AAATCAAGCA TGGGGTCGCC
ATCGCCGACG ACATTTTAGG GCCTTATCAC AAATCAGAAT ACAACCCGAT CAGCAACAGC
GGCCATGAAG TGGTGGTGTG GAATTACCAA GGTGGCGTTG CAAGCTTATT GACCACTGAC
GGTCCTGAGA AAAACACCAT TCAGTTTGCC CCTGACGGTA TTAATTTTGA TATCAAAGCC
CATATCAAAG GGGCGCCAGA AGCGGTTGGT TTATACCGGC CAAGCAACAT AGAAGACACC
TCTCCCCCGG GCTTACATTG GGGTTTATGC CATAAATACG ATAGCAGTTG GAATTGGAAT
TACATTTGTC GTTATCGTTT AAAGAAACAA GTATTGGACG CTGGCACGTT TCAAAACAGT
AACTAA
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| Protein sequence | MTQAKQKQSL ATKRAIERGY DSKNADWMIE FETSPLKGDF AFEEGVIRRD PTSVISVDDV
YHCWYTKGTG ETVGFGSTNP DDKVFPWDLT EVWHATSRDG ETWHEQGPAI TRGTPGAFDD
RAVFTPEVLA HNGKYYLVYQ TVQYPYTNRQ IEQIAIAHAD SPFGPWIKST APILSPSMDG
EWRGDEDNRF HVHSKGSFDS HKVHDPCLLV FNGKFHLYYK GETMGEEMNF GGREIKHGVA
IADDILGPYH KSEYNPISNS GHEVVVWNYQ GGVASLLTTD GPEKNTIQFA PDGINFDIKA
HIKGAPEAVG LYRPSNIEDT SPPGLHWGLC HKYDSSWNWN YICRYRLKKQ VLDAGTFQNS
N
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