Gene Patl_1965 details

Gene Information

• Locus tag: Patl_1965
• ID: 4172100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 2381708
• End bp: 2383843
• Gene Length: 2136 bp
• Protein Length: 711 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638054973
• Product: hypothetical protein
• Protein accession: YP_661537
• Protein GI: 109898282

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.973431
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCAA CTCAAGCATC TAAATTTTTG TTAGCTAGCG TCGCCTGCTC GGTCATTACG 
GCCTGCGGTG GTAGCAGTGG CGGTAGTTCA GCGCCCACAG TTTCAAGTAA CTCACCTTCC 
CATGGCGGCG ATATTTCACT GACCTATTCA GAGAAAGATC CGTTCAAACG TCTTTTTCTG 
CTAGGTACAC CTGCCGGTGA AAATAGTGGT ACGGGTGTGG CCACCGACAT GGACGGCGAT 
ATCCTGCGCA TCACAAACAT CAGCTCAAAC CTAACGGACA TGACAGGCTT TGAGATAGAC 
GGCTTGTATT TAGGCATACG CCCAGAAGCT GTCGCACCCA CCTTAGATAC GGGTGAGTCT 
TTAACAATGA CACTCACCTA CGACATTACT GATGGCAGTA ATACCACAGC TCGTTCAGCC 
ACTATTACTA TTACCGGCGA AGATGTAGCG CCAGTGGCAG AAGGTGATCT TGCAGGTAAC 
TTTACGCGTG ATACAGGTAC GGCGGTCGTA GATTTGCTCA AAGATGTTGT GGATGGCGAT 
GATGAACCAT TAACCGCATT TGATGTCATC GCAGATCCCA ATAATCCATA CAGCATCCCG 
TTTACTATCA ATGAAGATAG CCAGTTAGAG CTTGATGTAA GTGCGGTTGA ATCACAAATA 
CCAGATGGTG AAAAAGTTAC GTTCAGTTAT ACCTATAAAG TCAAAGATCA CCGCTTTGAG 
ATTGATCGCA ATTTAATGAT TAATATATTG GGTGTACAAG ACATTCCTGG CGCTCCACTT 
ATCTTAAATT ACTTTTTAGA AGCGAGTGCC AATGAAACGG ATGCCGTTCA AACATATGAT 
TTAACTCAAG AAACATTAGA ACGCGAGGGC GATGAAATTG TCATAACTGA TCTAACCCTC 
GATGGCGAAG CAGAGTTACC CTACGGTGTT GAGCTTGACG GAAATATGCT TCACGTTGAT 
CCTCACGCCC ACTTTAATGA TGTCGCTAAC GGCCAAAGCA TCGCCCTTTC ATTCCTATTT 
AAGGTAGCAG ATGATGCCGG TAATACCGCT GATGGAGAGA GAAGTTTAGT CGTTACTATA 
AATGGAGAAG AAACAAACCT AGTAGCGGCA TCTGGGTTTA ACGCCGATTT TGAAGATCCT 
ACATTTTTAG GACCACTCGA TAAATCGGTC AACCCAGCAG GCTTCGTATG GGGATTCGCC 
AACTGGGGCT GTCCTGTTAA AGAGATCCGC AGTGATGCGG CTAAAACCGG TGACTATGGG 
CTGTTCATGC AAGGTAGTTT TTGCCATTTT GAAGTACATA ACATCGTCAC TTCTTTAGAA 
GACAATCAAA AATACGCTAT GTCGTATTGG CTAAACAATG AAGCCTCTAA CGGAACGAAT 
GGCAACCCAT ATGTACCACT ATTTACGACA CCAAACGAAG GGTCTGATCT GAATAATAGA 
TTCTGGATGG GTAGCCGATA TTTCGATCAA TCTCTAAATG TTTGGATGGA ACATGTGCAG 
TTAATTAATA CTGGCGAACA TGGTAACTGG GACGGTTATG AAACGCTTCC CGTGCACTTT 
GGTTTGCTCA AGTATGATGA CTCTTACGCA GGTGGTAAAC ACAATATTGA CGATCTTAAT 
ATGGTCAAAT ATGGGCATTT TGATACTGCT GTGCATGACA TGTTGATCGA TGATGTCGGC 
CTGTTTGAAA ACGCTGAAAC CATTATCAGC GACGGCGGGA CCGTTGAAAT ACGCGACGTC 
GAGGGCATGC AAAAATTATT CGTTGATACC ACAGGTACCA CAGATGGCGT GACGATTAGC 
CTACCCATCA AAGCTGGAGC AATTAACGCT GGTGGCCGTT ACGCCGTGGT ATTGGATGCG 
CAGCTAATAA ACCACGACAC CCTATATACT GCGGGCGAGA GTACGGTTGT TCTGTACCAA 
ATCAACCTGT CTAATGGCAC AGAAACTATC GCCGCCAATG GTAGCGGTAC AACTGAGGGA 
GCTGACAGTA AAACCTCAGA CATCATCATT ACTGAAGAGT TTGGCCGCAG CGCAGCGATT 
GATTGGTCAC AAGAAACCAT GACATTGAAC GTGATGCTCA CGGAAACAAA CGCCCAGTAC 
TATATTGATA ACGTACGTTT AATCGCTATT CCTTAA 

 

Protein sequence

MKSTQASKFL LASVACSVIT ACGGSSGGSS APTVSSNSPS HGGDISLTYS EKDPFKRLFL 
LGTPAGENSG TGVATDMDGD ILRITNISSN LTDMTGFEID GLYLGIRPEA VAPTLDTGES 
LTMTLTYDIT DGSNTTARSA TITITGEDVA PVAEGDLAGN FTRDTGTAVV DLLKDVVDGD 
DEPLTAFDVI ADPNNPYSIP FTINEDSQLE LDVSAVESQI PDGEKVTFSY TYKVKDHRFE 
IDRNLMINIL GVQDIPGAPL ILNYFLEASA NETDAVQTYD LTQETLEREG DEIVITDLTL 
DGEAELPYGV ELDGNMLHVD PHAHFNDVAN GQSIALSFLF KVADDAGNTA DGERSLVVTI 
NGEETNLVAA SGFNADFEDP TFLGPLDKSV NPAGFVWGFA NWGCPVKEIR SDAAKTGDYG 
LFMQGSFCHF EVHNIVTSLE DNQKYAMSYW LNNEASNGTN GNPYVPLFTT PNEGSDLNNR 
FWMGSRYFDQ SLNVWMEHVQ LINTGEHGNW DGYETLPVHF GLLKYDDSYA GGKHNIDDLN 
MVKYGHFDTA VHDMLIDDVG LFENAETIIS DGGTVEIRDV EGMQKLFVDT TGTTDGVTIS 
LPIKAGAINA GGRYAVVLDA QLINHDTLYT AGESTVVLYQ INLSNGTETI AANGSGTTEG 
ADSKTSDIII TEEFGRSAAI DWSQETMTLN VMLTETNAQY YIDNVRLIAI P