| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1960 |
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| Symbol | |
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| ID | 4172095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2376031 |
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| End bp | 2376801 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054968 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_661532 |
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| Protein GI | 109898277 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.124593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGTGACA AGCCCACAAC CAAATACGCG GTACCTGCCC TAGATAAGGG CTTAGACATA
CTGGAATATT TAGCCAGCCA AGAATTACCC CGCTCCCAAA GCGAAATAGC CCATGGCTTA
GGGCGCAGCC CAAATGAAAT ATTTCGTGTG TTGGTGGGCT TAGAGGCCAG AGGTTATTTA
TTGCGAGATG ATATATCAGG GCGATATCGA ATCTCATTCA AACTGTATAA TTTATCTCGC
AGTATTTCGC CGATTGACCA AATGCGTCAA TGCGCCCTGC CTTACATGGA AGATCTTGCG
GTTAAAATTG GCCAGTCGTG TTATCTATGT ATGCTGTATC AAAGCCAAAC CATGGTAATT
ATCCAAGCGC GCAGCCACAG CCCTGTGTTT CTGAATATTA CCGAAGGATC ATTATTCTCA
ACTCTTACTT CTACAGCGGG TAAGGTACTG CTGGCTAACA GTAACCCCTC AGTAAGAAAA
ATGTTACTCG AACACGACCC TGATTTCGCT AGCTTAAGCA AAAAACAACA GCAGGACTTA
CAAGTAGAAC TAGCACGCAT CGAAGCAGAT GGTGTTTATG TGCAATCAAA CATCTTGATT
GACGGGGTAA CCGATGTCGC AACCTTAATA GGCCAGCCCC AAGGAAAAGT TATCGCATCA
TTAGCGGTCT CTTCACTACA CAGCAAACTC GGTAAACAAC TTGAACAAGA CCGTTTAATC
AACCACCTAA CCGACACCGC AAACATCATT ACCGAACAGT TGGGTTGTTA A
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| Protein sequence | MSDKPTTKYA VPALDKGLDI LEYLASQELP RSQSEIAHGL GRSPNEIFRV LVGLEARGYL
LRDDISGRYR ISFKLYNLSR SISPIDQMRQ CALPYMEDLA VKIGQSCYLC MLYQSQTMVI
IQARSHSPVF LNITEGSLFS TLTSTAGKVL LANSNPSVRK MLLEHDPDFA SLSKKQQQDL
QVELARIEAD GVYVQSNILI DGVTDVATLI GQPQGKVIAS LAVSSLHSKL GKQLEQDRLI
NHLTDTANII TEQLGC
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