| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1956 |
|---|
| Symbol | |
|---|
| ID | 4172091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 2372202 |
|---|
| End bp | 2372597 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638054964 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_661528 |
|---|
| Protein GI | 109898273 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.784413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGCA CTATCCTGGC CTTATGCCTT TCAATCTTAC TCTTGTTTAC AGCCAATGCT
GTGCAAGCAG TTACCGCAGA ACAAGCGTTC GCCAGTCAAA AAAGTGATGT GCAAGTCAAG
AGCATGGGGA CTGTGACCAG AGTTTTGAGA GACGATAATA AGGGTTCACG TCATCAAAAA
TTCATTTTAA AGCTGGTCTC AGGGCAAACC ATCTTGATAG CCCATAACAT CGACCTAGCG
CCGCGAATTG TTGGTATCGC CAAAGGCGAT ACAGTACAGT TTTATGGTGA ATATGAATGG
AGCAGTAAGG GCGGCGTAGT GCACTGGACT CACCACGACC CTCAGAATCG TCACGTACCG
GGTTGGTTAA AGCACAAAGG CAGAGTTTAC CAATGA
|
|---|
| Protein sequence | MHSTILALCL SILLLFTANA VQAVTAEQAF ASQKSDVQVK SMGTVTRVLR DDNKGSRHQK
FILKLVSGQT ILIAHNIDLA PRIVGIAKGD TVQFYGEYEW SSKGGVVHWT HHDPQNRHVP
GWLKHKGRVY Q
|
|---|
| |