Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1933 |
Symbol | |
ID | 4172780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2340837 |
End bp | 2341034 |
Gene Length | 198 bp |
Protein Length | 65 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638054941 |
Product | thiamine biosynthesis protein ThiS |
Protein accession | YP_661505 |
Protein GI | 109898250 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2104] Sulfur transfer protein involved in thiamine biosynthesis |
TIGRFAM ID | [TIGR01683] thiamine biosynthesis protein ThiS |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAACTA TTTATTTTAA CGGCGAGCCG TTCAAGGTAA CGCAACAGTC ATTGCCTGAC GTCCTTCGAG AACTCAATGC ACCTGCTATG TGTGCGGTCG CGGTTAATGG ACAGTTTGTG CCTAAAAATG AGCATGAGAC TGTGGTACTG CAAGAGCAGG ATGCTCTTGA TGCGTTCACA CCTATGCAGG GCGGCTAG
|
Protein sequence | MLTIYFNGEP FKVTQQSLPD VLRELNAPAM CAVAVNGQFV PKNEHETVVL QEQDALDAFT PMQGG
|
| |