| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1835 |
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| Symbol | |
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| ID | 4173020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2209662 |
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| End bp | 2215199 |
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| Gene Length | 5538 bp |
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| Protein Length | 1845 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054844 |
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| Product | hypothetical protein |
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| Protein accession | YP_661409 |
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| Protein GI | 109898154 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAC GAGCAGTCCA CATTAGATCT CTAACGAATG ATATCAGTGC AATCCAGCCT
ACCAGCGCGC AGGCAATGCA GCCGTTACAT CACCCCAATA GACTAAGCCA AGTCGCTTTA
GCTATCACCA TTGCACTGGC AAGTCAGCAG TCCTTCGCTG GTGTGCAAAC CGACGAGAAT
ACCCGTTCAA ATGTGTCAAT GGGCAGCTTT AATTTTGGCG TGTCAGACCA AAGCGTTTGG
GCGCCTGATG GCCCGAGCAG CTTCAAAGTG GACTGGGAGT TAACAAGCAA AGAGTGGGAC
TCTGTGTTTG GCAGACCGCC CAGAGCCCGC TTAGGTGTAG GCAGAGTTGA AGGCGGTTGT
TTTCTAGGAG CCTGTGCGTA TTTTGGCGCA GCAGCGGGCG TGCAGCTTGA AGCCTATATG
TTACCTTATT TGAACCTTAA CCTTGAGCCT GGCACCTTCG ATGCCACTGC TCATTACACC
CCTACTGTCA GCTATCAATT TGAGGGCTTA GGGACCGATA GATTTTCCCT CGATACGCGT
TCTGGGTTAC ATGAAGAAAA CTCTAGCTTC TCAGTAGATG CGCCGCGATT TGAGCTTAAA
ACGGGGTTAA ATATTCAAAC CAATTTAAGC CTATTTGCTG AGGCGTGCAT AGTAGACTGC
TTTATCGATG AGAAATACGT CATACCCGGC ACCACCACTA ATTTTGATAT CGACTTACTA
AGAATTGATT CCTTCAAGGG CGAGTTTGCG TACCTCAATC TTGATATAAA TGAAGTATCC
GCTCAGGACA TTGTCGACTT TATCTCGGGT GATGCCAACG TCGTGGATGC GTTTTATCAT
CAAATTACCA CCGAAGATGT GGCGAATAAA GTCAAAGAGC AAGCGGACAA ACGACTCAGT
GAAGGGAAAG CCAGCACCGT TAAAAATTTA CTGGAAATTG ATACCGGTCC TATCTCTATT
GATCTATCAA ACCCTTTTAC TGAAAACGCA CAAGGCAGTA TTAACAACGG CAGCTTTTCC
GCCAGTCTTG GGGGCGATTT ACTTGATGTC AGCTTGGATA TAGACGAAGT CATCGGCTAT
GCCTTTGGCT TGACCAGTGG CGGCACGCTT GCGTTTGAAG AAGGTCCATT AACGGCTCAA
CTCACAATAG GTGACATCAA CGCTGGGCCC ACCGTTGATT TAATTCAAGA TATCAGCGTG
ACGCCAGAGC TGATGGTCAA CATGCAGTTC GATAATGAAA TATTTGTCGC CGGGCGCATC
GGTAAACAAA CCTCTTACTA TGGTGCATGG GACAGCCTGC CAGATTTCGC GCTACTCGCT
GACTCAAACA TACTGCGTGA TGGTGAGCAA CCTCAAGACA AAACCGTTAA TGCCAGTACC
GCATTTTCAT TAAACGCCAC GGTTAAAAAT CGCACATATT TGGATATCGG AGCACAAGTA
TCAGGCGAGC TGCTATCTGC CTCAATCGAT ATTGATGATT TTACCGCCCT AGCGATTGGC
CCCTTGTTGT CATTCCAAGA AGAAGCATCG TTATTTGAAG TGGATGTTTA CAATAATTCC
TTCGCACTTA ATCACTGGTC AAGCATAGAC GCCAACGGTG TTGAAACAGG CGTAAAAACC
TTGCAAGGTG AGAACCTCTC GTTCAATGGC TTTGGCGAAA TAGTCTTTCA AGGTAGAGGT
CAAGGTGATT TCAATAGCGG CGCGAGCGAC GCATATTATT ATGATGACGA CCGCATCGAT
CAGTATCTAA CCGCAGATGA ATTGATTAAA TATGATGCAG GCGAGCGCTA CTACAACCAA
ATACAAGACA GCTCGCTCAA AAATAGACTG TACCAAGAGT ACACCGTTGA CCAGTATCAA
GCGGGTCAAA TCATGCAAGA CGGTAAATTA ACCGTCAATT CAAATCGCAC TATGACCATT
GAAGCTGAAG CAAGTGTTGA AATGGGCATG GACAATAACT ATCGCGTGCG CAATATTTTC
GAAGAAACCG AAGACCGCAC AGAGTTAGGG CTTGTTAACC AAGGGCAACT TAACGTTTAC
GGGGAAATAT ACAGCAACGC CGGTATTGAA AATCAACAAT ACGTGTTTCG AAACACAAGC
GATGCGCAAA TTTTTGTTGG TGGTAACGGC TGGCTTAAGT TTGACGGGAA TATGCAAAAT
CAGGGTGAAA TCAACAATTA TGGACGAATA GAAAATACCG CGGAAGCGAG CTGGTCAACA
GGAAAAATTG CCAATAAAGT GGGGGCTAAC TTTGATGTGT ACGGCAGCTT CGAGCTCATC
AACAATCACC AAATATCTGA GCAATACTCC AACGATGGCA CTGTGGGTGT GTATAAAGGG
GGCGAGCTGG TCGTTAAATC ATCCACTGGC CAAGGGTCTT TAAACAACAC TGGTACCCTA
TCCATTGAGC ACGGCGCAGA GCTTCGCACC CACAATACGA CGAATTTAGC GACGACGGTG
ATCAATAATC AAGGTTTAGT CGAGAATGCA GGGTATGTGT TCAACAGCGC TCGAAGCACC
ATTAATAATG GCACGACATC AAGTGTTTCC CCTGACAACA TTGCCAATTC AATGGTCGCA
TGGCAATCCT CTCGCACATC CATTGAGCAG CAGTACAATG CGGACGGAGG CTACCTAGAC
ACCAATCAAC AAATGGAAAA AGCGGCTAAC GCCAATCGTA ACGCCAAGTT ATATTGGCAT
GACGATCCGT GGTCGAACGA AGCGACCTAT GCAACGACCT CAAACACCTT AAATAACTAT
CGTAAAGACG GCGGTACGCT AGACCAAGCC TATCAGGCAG TACAAAGTGA AGTAGATACC
CTAAAAGCGG CCGGGTTTGG CGTTTGGGAA AACAACAAAG ACGCCTTACT CGTTAACGAA
GGCACTTTTA ATAACAATGC TGTAATGGTC AATCACGTTG GCGCACACTT ATACAATGAG
GGCGCACTGA ACAATAACGG TTACCTCAGT AATACTGGGC GGTTGGTAAG CCAAAATAGC
AGCGGGATCA TCAATAAAGG CCTGATAGAA AACGGTACTG GTTCGGTGAA ACTAGCCAAT
ATTTCTACGC TGGTGGTAAT GGACCACTTA GATAACACCG GACACATTAT CAACCACGAT
ACGATGACAA ATTATGGCGA GATATATCAT GAACAAGGAA ATGCCCAGTC ACCATTACAA
CCGAAGATCA CCAACCATGG ACTGCTTTCA AACGTAGGTA CGATGCATAG TGCTGCCCAG
TTGAGCAACG AGCAAGGCGC ACAAATTGAC AACTACGGCC ATATTGAAAA CAACAGCACA
CTGAACAATC ACGGCTTTTT AAATAACGGC ATCGAAAATC AAGCGGCATC AACGATCAAC
GATAATGCCA GCGTCATTGC CAATGCACAG CTATTCAATA ATACGTCCCG CGCGCTAGAA
GTAGAAGATA TTCAGTTAAC AAAGCTACTG ACTAAATTCG AAAATGAAAG TGCTCGCCAA
TCGCTCAATG GCTTTAAAGG AGAAGTAAGC GATGCCAGCA CGAATGCGTT TGCTATTCAC
CTCTATGAGA AATACTTGGT GTCTGATCAA GCCTACGGTT ACGGACCACA AGCAGGCACA
TTGGAAGACA ACCGCGAGTC TATCCGCGAT TGGGTCACCA GTAGAGGTCA GTTGCGCCAG
GAAACCAAAG ATGCGTGCCA TAACAATATG CTTGAGTGTT ATAAAATTTA TTACGGTGAT
CGAAACGATG TAAACGACAG CGTTAATGCA ATAAATTACG TTTTAGGGGA TAACAATACT
GGTATACAAC ATTACAGTTT GTACGCAGAT TCCGGCCTAG AGCAGAATAT TAATGGTGCC
CAGGGTGAAC ACGGTGACAA TCAGAATCGC TTCGAATGGA CCATGTTGAT GATGCTCAAT
GCAGAAGGGT TAGGCCTTAA CTCTGTATTG GATTTGGAAG CGATGCAAAA CATTTATCCG
GGTCAGTTAA ATCCCCAAGA TGAAGCACGT TTGTTTAAAT CTAATTACTT CGCCTACGGC
GACAGAAGCA ATTTTGGCAG TGGCGATATT ATCGGTTTAG ATGCGCTATA TGCGCTGTGG
ATTGACAAAG CCTTCCTAGA AACCAGCGGA GGATACGGCC GTCACGGTAA AAGCTTTACC
TTGAATGACG TTAATGTAAA CCAAAATTCA GCATCTTATG CGTTGGTATC TTTGTATCAA
GGCGTGCATC AGTCGACGGC ACAAATCATG GGGCTAAACG AGACACTCAG TGGCCTCAAT
GTCGAATTGA GTAACGTGAC TTCAATCGAT GCAACACTAA TTAACAATGA CACCATCAAT
AATTATGGGG TGATAAACAA TAGAGGCCGC ATCACTAATC AAACAGGTAG CATCATTAAT
AATGACGGCG CCCTTATTAA CGCCGCAGGC GCTAACATCG ATAACCATGG CTCGATTGTG
ACAGATAACA ACGGCGTTTT ATTATCCTCA GGCACAATGG TCAATACGGG TACGCTTGAC
GTTAAATCTG GCACCATAAT CAACGAAGGG TCACTCATCA ATAATGGCGA TATCCTGCTG
TCAGCATTGT TCAGTGATGA TGGTGGCGAG CAGGCAACGG TTGATAATGC GGTGTTTACC
AACCGTGGAT ATATGGAAAA TAACGCCTCA GGGCTGATTG AAGTGGGCAT TAATAGCCAA
CAGGTCGATA CGGTAGCGGG CACCGCTAGC GGTAACTATT TTGAAAGTAC ATTTGAAAAT
ATAGGCCAAC TGGTGAATCG CGGTCGTATT GTGATAAACG ATATACTGTT TAATAGCGGA
GTTATTGCGA ATCTAGAAGG TGCTGAGTTC GAAAATAACG GTCTTATCAA TAATGCCAGA
GGGAGTCTTA TTTCCTTTGC TGACAGCGCC ACCTTAGATG GGTCAGTCAT CAACAACGGG
CTCATTGCTG TTGCCGATAG CGAGTTGCTA ACCCTCACGG GGGGAATAAT GGGAGCAGGA
ACGTTTGCGG GTGATGTTTT GTTATCAGGC ACAAATATCA GCCCAGGCAA TAGCCCAGGT
TTAATGACCT TTGATGGCAA CGTGAGTGCG CTGGATACCA GCTGGGTGTT CGAAATTATG
GGTACCGAGC GCGGCATAAG TTACGACGCT ATCGATATTA CAGGCAATCT AACTTGGTTG
GATTTATACC ACTCGTTCAC TGTCTATTCT TTCATCGATT TTGACACAGT GATGAATTTT
GATTTCAACT TCTTAAATGT CTCCGGTGAT ATTTTAGACG GTGATGGCAA CGTAATAATA
GACTTAACAA CAACTATGCT GACATTTAGC GACAACTGGT TTGGTCGCTG GATTGCAGGC
TCTGATGGTT GGTCCCTAGC GTTAGAGTAT ATCGCTGACG AACTCACCTA TGATATGCAA
TACGCGCATT TACAACGTGA TAATACCAGC GATGTACCAG AGCCACCGGT GTGGATGTTC
CTTTTCTTTA GCGCGGCGTT TTTCATACTG CGTAAAGACG GCCCCGCACC CAAGCGAAAA
GAGGATTTGC TTCCATAA
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| Protein sequence | MNTRAVHIRS LTNDISAIQP TSAQAMQPLH HPNRLSQVAL AITIALASQQ SFAGVQTDEN
TRSNVSMGSF NFGVSDQSVW APDGPSSFKV DWELTSKEWD SVFGRPPRAR LGVGRVEGGC
FLGACAYFGA AAGVQLEAYM LPYLNLNLEP GTFDATAHYT PTVSYQFEGL GTDRFSLDTR
SGLHEENSSF SVDAPRFELK TGLNIQTNLS LFAEACIVDC FIDEKYVIPG TTTNFDIDLL
RIDSFKGEFA YLNLDINEVS AQDIVDFISG DANVVDAFYH QITTEDVANK VKEQADKRLS
EGKASTVKNL LEIDTGPISI DLSNPFTENA QGSINNGSFS ASLGGDLLDV SLDIDEVIGY
AFGLTSGGTL AFEEGPLTAQ LTIGDINAGP TVDLIQDISV TPELMVNMQF DNEIFVAGRI
GKQTSYYGAW DSLPDFALLA DSNILRDGEQ PQDKTVNAST AFSLNATVKN RTYLDIGAQV
SGELLSASID IDDFTALAIG PLLSFQEEAS LFEVDVYNNS FALNHWSSID ANGVETGVKT
LQGENLSFNG FGEIVFQGRG QGDFNSGASD AYYYDDDRID QYLTADELIK YDAGERYYNQ
IQDSSLKNRL YQEYTVDQYQ AGQIMQDGKL TVNSNRTMTI EAEASVEMGM DNNYRVRNIF
EETEDRTELG LVNQGQLNVY GEIYSNAGIE NQQYVFRNTS DAQIFVGGNG WLKFDGNMQN
QGEINNYGRI ENTAEASWST GKIANKVGAN FDVYGSFELI NNHQISEQYS NDGTVGVYKG
GELVVKSSTG QGSLNNTGTL SIEHGAELRT HNTTNLATTV INNQGLVENA GYVFNSARST
INNGTTSSVS PDNIANSMVA WQSSRTSIEQ QYNADGGYLD TNQQMEKAAN ANRNAKLYWH
DDPWSNEATY ATTSNTLNNY RKDGGTLDQA YQAVQSEVDT LKAAGFGVWE NNKDALLVNE
GTFNNNAVMV NHVGAHLYNE GALNNNGYLS NTGRLVSQNS SGIINKGLIE NGTGSVKLAN
ISTLVVMDHL DNTGHIINHD TMTNYGEIYH EQGNAQSPLQ PKITNHGLLS NVGTMHSAAQ
LSNEQGAQID NYGHIENNST LNNHGFLNNG IENQAASTIN DNASVIANAQ LFNNTSRALE
VEDIQLTKLL TKFENESARQ SLNGFKGEVS DASTNAFAIH LYEKYLVSDQ AYGYGPQAGT
LEDNRESIRD WVTSRGQLRQ ETKDACHNNM LECYKIYYGD RNDVNDSVNA INYVLGDNNT
GIQHYSLYAD SGLEQNINGA QGEHGDNQNR FEWTMLMMLN AEGLGLNSVL DLEAMQNIYP
GQLNPQDEAR LFKSNYFAYG DRSNFGSGDI IGLDALYALW IDKAFLETSG GYGRHGKSFT
LNDVNVNQNS ASYALVSLYQ GVHQSTAQIM GLNETLSGLN VELSNVTSID ATLINNDTIN
NYGVINNRGR ITNQTGSIIN NDGALINAAG ANIDNHGSIV TDNNGVLLSS GTMVNTGTLD
VKSGTIINEG SLINNGDILL SALFSDDGGE QATVDNAVFT NRGYMENNAS GLIEVGINSQ
QVDTVAGTAS GNYFESTFEN IGQLVNRGRI VINDILFNSG VIANLEGAEF ENNGLINNAR
GSLISFADSA TLDGSVINNG LIAVADSELL TLTGGIMGAG TFAGDVLLSG TNISPGNSPG
LMTFDGNVSA LDTSWVFEIM GTERGISYDA IDITGNLTWL DLYHSFTVYS FIDFDTVMNF
DFNFLNVSGD ILDGDGNVII DLTTTMLTFS DNWFGRWIAG SDGWSLALEY IADELTYDMQ
YAHLQRDNTS DVPEPPVWMF LFFSAAFFIL RKDGPAPKRK EDLLP
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